RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 RPP38P78345 283 aaKnown RBP9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 RTP5Q14D33 572 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 ZSWIM7Q19AV6 140 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 CCNJQ5T5M9 372 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 HEPHL1Q6MZM0 1159 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 CBLL1Q75N03 491 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 GALNT10Q86SR1 603 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 SLC34A3Q8N130 599 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 ZSCAN1Q8NBB4 408 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 CLEC1AQ8NC01 280 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 SIMC1Q8NDZ2 872 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 C17orf47Q8NEP4 570 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 OR8K3Q8NH51 312 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 OR52P1PQ8NH57 321 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 NUBPLQ8TB37 319 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 M1APQ8TC57 530 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 CANT1Q8WVQ1 401 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 NKD1Q969G9 470 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 TP53INP1Q96A56 240 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 FER1L6-AS2Q96M78 137 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 DOHHQ9BU89 302 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 PINK1Q9BXM7 581 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 RNPEPL1Q9HAU8 725 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 BCL2L10Q9HD36 194 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 CCDC88CQ9P219 2028 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 STOML1Q9UBI4 398 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 TEKT2Q9UIF3 430 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 FBXL4Q9UKA2 621 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 MKLN1Q9UL63 735 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 PCDHGA6Q9Y5G7 932 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 FRYLO94915 3013 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 MYO15AQ9UKN7 3530 aa9.52□□□□□ -0.89
PRPF38A-202ENST00000474048 LOC101059948A0A1B0GTJ6 334 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 GXYLT2A0PJZ3 443 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 CDC14CA4D256 554 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 NME6O75414 186 aaPredicted RBP9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 E2F6O75461 281 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 LDLRP01130 860 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 CHRM4P08173 479 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 PABPC4LP0CB38 370 aaKnown RBP9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 COX6A1P12074 109 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 UQCRBP14927 111 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 LCN1P31025 176 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 GPR143P51810 404 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 PSG6Q00889 435 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 KCNC4Q03721 635 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 CHRNEQ04844 493 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 EFR3AQ14156 821 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 PCOLCEQ15113 449 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 PLAG1Q6DJT9 500 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 ENPP6Q6UWR7 440 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 MRGPREQ86SM8 312 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 RANBP3LQ86VV4 465 aaPredicted RBP9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 ZDHHC21Q8IVQ6 265 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 C9orf40Q8IXQ3 194 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 BCORP1Q8N888 145 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF321PQ8N8H1 164 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 SMYD1Q8NB12 490 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 OR11G2Q8NGC1 345 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 THAP3Q8WTV1 239 aaPredicted RBP9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 OIT3Q8WWZ8 545 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 SDF2Q99470 211 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 BDH2Q9BUT1 245 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 SPRY4Q9C004 299 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 SEMA4CQ9C0C4 833 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 ZNF350Q9GZX5 532 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 NXF5Q9H1B4 397 aaKnown RBP9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 EVA1AQ9H8M9 152 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 HHATLQ9HCP6 504 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 MMP25Q9NPA2 562 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 ASCL3Q9NQ33 180 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 CCM2LQ9NUG4 571 aaPredicted RBP9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 P4HTMQ9NXG6 502 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 C6orf203Q9P0P8 240 aaPredicted RBP9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 DTX4Q9Y2E6 619 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 GPR55Q9Y2T6 319 aaPredicted RBP9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 SH3GLB1Q9Y371 365 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 GPC6Q9Y625 555 aaPredicted RBP9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 KCNE3Q9Y6H6 103 aa9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 RIF1Q5UIP0 2472 aaKnown RBP9.51□□□□□ -0.89
PRPF38A-202ENST00000474048 TCRBV5S2A0A599 114 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 TRABD2BA6NFA1 517 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 SOCS6O14544 535 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 AP3D1O14617 1153 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 TP53I11O14683 189 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 KIAA0513O60268 411 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 TIPRLO75663 272 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 CST1P01037 141 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 THBS1P07996 1170 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 ANPEPP15144 967 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 ENDOUP21128 410 aaKnown RBP9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 PRKAR1BP31321 381 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 DCTP40126 519 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 CASRP41180 1078 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 EFNA3P52797 238 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 PCBP3P57721 371 aaKnown RBP9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 SLC34A1Q06495 639 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 FUT5Q11128 374 aa9.5□□□□□ -0.89
PRPF38A-202ENST00000474048 DUSP8Q13202 625 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms