RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TCRBV5S2A0A599 114 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 GXYLT2A0PJZ3 443 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 TRABD2BA6NFA1 517 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 H3BNH8 94 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 REM1O75628 298 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 FABP3P05413 133 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 DBIP07108 87 aaKnown RBP9.04□□□□□ -0.96
CCM2-204ENST00000470837 GUSBP08236 651 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 COX6A1P12074 109 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 FASP25445 335 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 LCN1P31025 176 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 IFNA8P32881 189 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 SOX18P35713 384 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 CLK3P49761 638 aaKnown RBP9.04□□□□□ -0.96
CCM2-204ENST00000470837 EFNA3P52797 238 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 PCBP3P57721 371 aaKnown RBP9.04□□□□□ -0.96
CCM2-204ENST00000470837 CHRNEQ04844 493 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 DUSP8Q13202 625 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 PCOLCEQ15113 449 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 ZSWIM7Q19AV6 140 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 KIRREL2Q6UWL6 708 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 GALNT10Q86SR1 603 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 CYP4Z1Q86W10 505 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 C9orf40Q8IXQ3 194 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 ADGRG5Q8IZF4 528 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 SLC5A8Q8N695 610 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 ZNF614Q8N883 585 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 BCORP1Q8N888 145 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 SMYD1Q8NB12 490 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 NFAM1Q8NET5 270 aaPredicted RBP9.04□□□□□ -0.96
CCM2-204ENST00000470837 OR11G2Q8NGC1 345 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 OR52P1PQ8NH57 321 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 GEMIN6Q8WXD5 167 aaKnown RBP9.04□□□□□ -0.96
CCM2-204ENST00000470837 HOXB13Q92826 284 aaPredicted RBP9.04□□□□□ -0.96
CCM2-204ENST00000470837 FER1L6-AS2Q96M78 137 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 CHID1Q9BWS9 393 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 ZNF350Q9GZX5 532 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 NXF5Q9H1B4 397 aaKnown RBP9.04□□□□□ -0.96
CCM2-204ENST00000470837 VCX3BQ9H321 246 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 RUBCNLQ9H714 662 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 ZNF160Q9HCG1 818 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 MMP25Q9NPA2 562 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 RYDENQ9NUL5 291 aaKnown RBP9.04□□□□□ -0.96
CCM2-204ENST00000470837 ARMC1Q9NVT9 282 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 P4HTMQ9NXG6 502 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 C6orf203Q9P0P8 240 aaPredicted RBP9.04□□□□□ -0.96
CCM2-204ENST00000470837 STOML1Q9UBI4 398 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 FBXL4Q9UKA2 621 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 DTX4Q9Y2E6 619 aa9.04□□□□□ -0.96
CCM2-204ENST00000470837 GPC6Q9Y625 555 aaPredicted RBP9.04□□□□□ -0.96
CCM2-204ENST00000470837 SCDO00767 359 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 SOCS6O14544 535 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 TPST1O60507 370 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 ABCB7O75027 752 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 MFN2O95140 757 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 CLPSP04118 112 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 IFNW1P05000 195 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 CT45A8P0DMV1 189 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 CT45A9P0DMV2 189 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 ANPEPP15144 967 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 PRKAR1BP31321 381 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 MAP3K8P41279 467 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 GPR143P51810 404 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 SESN3P58005 492 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 RPP38P78345 283 aaKnown RBP9.03□□□□□ -0.96
CCM2-204ENST00000470837 KCNC4Q03721 635 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 SLC34A1Q06495 639 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 FUT5Q11128 374 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 EFR3AQ14156 821 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.03□□□□□ -0.96
CCM2-204ENST00000470837 TBC1D25Q3MII6 688 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 CT45A2Q5DJT8 189 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 EXOSC6Q5RKV6 272 aaKnown RBP9.03□□□□□ -0.96
CCM2-204ENST00000470837 FBXW10Q5XX13 1052 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 TYW3Q6IPR3 259 aaKnown RBP9.03□□□□□ -0.96
CCM2-204ENST00000470837 ENPP6Q6UWR7 440 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 NPSR1Q6W5P4 371 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 FRRS1Q6ZNA5 592 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 PPP1R32Q7Z5V6 425 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 MRGPREQ86SM8 312 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 DTX1Q86Y01 620 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 ZDHHC21Q8IVQ6 265 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 KBTBD2Q8IY47 623 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 SLC34A3Q8N130 599 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 CLEC1AQ8NC01 280 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 APCDD1LQ8NCL9 501 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 THAP3Q8WTV1 239 aaPredicted RBP9.03□□□□□ -0.96
CCM2-204ENST00000470837 OIT3Q8WWZ8 545 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 DIO2Q92813 273 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 TMBIM1Q969X1 311 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 ADIPOR1Q96A54 375 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 TAMM41Q96BW9 452 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 SDCCAG3Q96C92 435 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 DUS3LQ96G46 650 aaKnown RBP9.03□□□□□ -0.96
CCM2-204ENST00000470837 ZNF354BQ96LW1 612 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 WDR77Q9BQA1 342 aaPredicted RBP9.03□□□□□ -0.96
CCM2-204ENST00000470837 BDH2Q9BUT1 245 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 PINK1Q9BXM7 581 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 SLC38A1Q9H2H9 487 aa9.03□□□□□ -0.96
CCM2-204ENST00000470837 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms