RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 OR6N1Q8NGY5 312 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 RBPMSQ93062 196 aaKnown RBP13.2□□□□□ -0.3
ITGB4-202ENST00000449880 ZNF559Q9BR84 538 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 POLDIP3Q9BY77 421 aaKnown RBP13.2□□□□□ -0.3
ITGB4-202ENST00000449880 RDH14Q9HBH5 336 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 CD9P21926 228 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 DEFA6Q01524 100 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 AAK1Q2M2I8 961 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 FAM214AQ32MH5 1076 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 TIGD3Q6B0B8 471 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 OR6V1Q8N148 313 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 C7orf57Q8NEG2 295 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.2□□□□□ -0.3
ITGB4-202ENST00000449880 RAB8BQ92930 207 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 OR6C74A6NCV1 312 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 RPL10P27635 214 aaKnown RBP13.2□□□□□ -0.3
ITGB4-202ENST00000449880 TPMTP51580 245 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 BTG1P62324 171 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 SLC14A2Q15849 920 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 SSX2Q16385 188 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 MRPL10Q7Z7H8 261 aaKnown RBP13.2□□□□□ -0.3
ITGB4-202ENST00000449880 GPAT4Q86UL3 456 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 THSD1Q9NS62 852 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 NME7Q9Y5B8 376 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 MEIS3P2A8K0S8 358 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 A8MU76 341 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 POLR1CO15160 346 aaPredicted RBP13.2□□□□□ -0.3
ITGB4-202ENST00000449880 TRAPPC6AO75865 159 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 ITGA5P08648 1049 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 TUBG1P23258 451 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 HLA-DMAP28067 261 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 ADH7P40394 386 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 SOX3P41225 446 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 SELENOVP59797 346 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 ZNF440Q8IYI8 595 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 NT5C3BQ969T7 300 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 SLC6A7Q99884 636 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 STRADBQ9C0K7 418 aa13.2□□□□□ -0.3
ITGB4-202ENST00000449880 MARCH4Q9P2E8 410 aaPredicted RBP13.2□□□□□ -0.3
ITGB4-202ENST00000449880 PRSS3P35030 304 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 ZNF616Q08AN1 781 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 ALG10Q5BKT4 473 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 SLC16A9Q7RTY1 509 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 C6orf120Q7Z4R8 191 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 CADM3Q8N126 398 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 OR52B6Q8NGF0 335 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 OR6N2Q8NGY6 317 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 OR5W2Q8NH69 310 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 SSX3Q99909 188 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 ARHGAP9Q9BRR9 750 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 G6PC3Q9BUM1 346 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 SLC5A7Q9GZV3 580 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 WASH6PQ9NQA3 447 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 KCNK6Q9Y257 313 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 MYH10P35580 1976 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 SMAD9O15198 467 aaKnown RBP13.19□□□□□ -0.3
ITGB4-202ENST00000449880 CASC3O15234 703 aaKnown RBP13.19□□□□□ -0.3
ITGB4-202ENST00000449880 CAPNS1P04632 268 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 PTPN6P29350 595 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 CCINQ13939 588 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 C3orf49Q96BT1 292 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 TREX2Q9BQ50 279 aaPredicted RBP13.19□□□□□ -0.3
ITGB4-202ENST00000449880 ALG8Q9BVK2 526 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 PSORS1C1Q9UIG5 152 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 C1orf226A1L170 272 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 FAM221BA6H8Z2 402 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 WASH4PA8MWX3 477 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 ARPC1BO15143 372 aaKnown RBP13.19□□□□□ -0.3
ITGB4-202ENST00000449880 SSX4O60224 188 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 B4GALT2O60909 372 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 SULT1C4O75897 302 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 AMY2AP04746 511 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 JMJD7P0C870 316 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 ACVR1BP36896 505 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 ZNF41P51814 821 aaPredicted RBP13.19□□□□□ -0.3
ITGB4-202ENST00000449880 PER3P56645 1201 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 LNX2Q8N448 690 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 GPR62Q9BZJ7 368 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 SCG5P05408 212 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 ETFAP13804 333 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 M6PRP20645 277 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 FLI1Q01543 452 aaPredicted RBP13.19□□□□□ -0.3
ITGB4-202ENST00000449880 IRF4Q15306 451 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 PCGF3Q3KNV8 242 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 TMEM35AQ53FP2 167 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 SPIN3Q5JUX0 258 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 ZNF648Q5T619 568 aaPredicted RBP13.19□□□□□ -0.3
ITGB4-202ENST00000449880 PRMT8Q9NR22 394 aaPredicted RBP13.19□□□□□ -0.3
ITGB4-202ENST00000449880 CFAP20Q9Y6A4 193 aaKnown RBP13.19□□□□□ -0.3
ITGB4-202ENST00000449880 A0A0D9SEW6 157 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 LEFTY2O00292 366 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 SLC33A1O00400 549 aaPredicted RBP13.19□□□□□ -0.3
ITGB4-202ENST00000449880 SOCS7O14512 581 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 GPR37L1O60883 481 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 C1QBP02746 253 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 DRD5P21918 477 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 GABRA5P31644 462 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 SOX2P48431 317 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 OPCMLQ14982 345 aa13.19□□□□□ -0.3
ITGB4-202ENST00000449880 TAZQ16635 292 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms