RNA–Protein interactions for RNA: ENST00000439936.6

COPS3-203, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5 BASIC

Gene COPS3, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-203ENST00000439936 POLR3GO15318 223 aaPredicted RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 CFLARO15519 480 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 PEX1O43933 1283 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 NME2P1O60361 137 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 ERN1O75460 977 aaKnown RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 REM1O75628 298 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 SLC25A12O75746 678 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 SLC22A3O75751 556 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 RASAL1O95294 804 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 PSMG1O95456 288 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 CPSF4O95639 269 aaKnown RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 ABCB1P08183 1280 aaPredicted RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 VIMP08670 466 aaKnown RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 IFI6P09912 130 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 IDO1P14902 403 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 NAGAP17050 411 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 ABCD3P28288 659 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 MAP3K8P41279 467 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 ZFP36L2P47974 494 aaKnown RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 CCT3P49368 545 aaKnown RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 CLNS1AP54105 237 aaKnown RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 NRG3P56975 720 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 CORO7P57737 925 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 HBA1P69905 142 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 PSG6Q00889 435 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 GAB1Q13480 694 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 NNATQ16517 81 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 NTRK2Q16620 822 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 GSTA3Q16772 222 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 PDCD4Q53EL6 469 aaKnown RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 SPANXN4Q5MJ08 99 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 SLC22A10Q63ZE4 541 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 ZNF324BQ6AW86 544 aaPredicted RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 CDPF1Q6NVV7 123 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 PAOXQ6QHF9 649 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 RTL4Q6ZR62 310 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 WDR53Q7Z5U6 358 aaPredicted RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 SLC44A2Q8IWA5 706 aaPredicted RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 GPALPP1Q8IXQ4 340 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 CLECL1Q8IZS7 167 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 TMEM178AQ8NBL3 297 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 PSD4Q8NDX1 1056 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 OR4N2Q8NGD1 307 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 DNAJB8Q8NHS0 232 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 PSMA8Q8TAA3 256 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 CPT1CQ8TCG5 803 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 GRHL3Q8TE85 626 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 GATAD2BQ8WXI9 593 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 SPACA9Q96E40 222 aaPredicted RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 FAM120BQ96EK7 910 aaKnown RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 GIMAP5Q96F15 307 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 PLPPR2Q96GM1 343 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 C16orf58Q96GQ5 468 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 SGCZQ96LD1 299 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 C5orf34Q96MH7 638 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 VSTM2LQ96N03 204 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 BTBD9Q96Q07 612 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 BARD1Q99728 777 aaKnown RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 ARPC5LQ9BPX5 153 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 TRIM4Q9C037 500 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 CCDC134Q9H6E4 229 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 CXorf36Q9H7Y0 433 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 PROK2Q9HC23 129 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 SDR39U1Q9NRG7 319 aaPredicted RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 FGFR1OP2Q9NVK5 253 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 DDX18Q9NVP1 670 aaKnown RBP6.86□□□□□ -1.31
COPS3-203ENST00000439936 PCDHGB4Q9UN71 923 aa6.86□□□□□ -1.31
COPS3-203ENST00000439936 NCKAP5O14513 1909 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 BSNQ9UPA5 3926 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 FRG2CA6NGY1 282 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 CAPN14A8MX76 684 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 E9PBE3 544 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 G3V3Y1 287 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 KLRC4-KLRK1H3BQV0 150 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 RNASET2O00584 256 aaKnown RBP6.85□□□□□ -1.31
COPS3-203ENST00000439936 ACOX3O15254 700 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 TSPAN2O60636 221 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 PPM1BO75688 479 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 NKX2-2O95096 273 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 P04436 131 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 CCL3P10147 92 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 NTF4P34130 210 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 GABRA3P34903 492 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 PIGAP37287 484 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 KIR3DL1P43629 444 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 POLR2JP52435 117 aaKnown RBP6.85□□□□□ -1.31
COPS3-203ENST00000439936 FBXW4P57775 412 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 GPR85P60893 370 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 PMP22Q01453 160 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 SF3A3Q12874 501 aaKnown RBP eCLIP6.85□□□□□ -1.31
COPS3-203ENST00000439936 DPY19L1Q2PZI1 675 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 FAM174BQ3ZCQ3 159 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 CYP27C1Q4G0S4 372 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 ANXA8L1Q5VT79 327 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 CGB2Q6NT52 195 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 NPSR1Q6W5P4 371 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 NUP54Q7Z3B4 507 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 ANKRD46Q86W74 232 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 FUNDC1Q8IVP5 155 aa6.85□□□□□ -1.31
COPS3-203ENST00000439936 SLC34A3Q8N130 599 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms