RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, human

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQB2-231	ENST00000435145	HNRNPA0	Q13151	305 aa	Known RBP	15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	MBOAT2	Q6ZWT7	520 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	GDF7	Q7Z4P5	450 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	NRARP	Q7Z6K4	114 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	ASPG	Q86U10	573 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	NKAIN4	Q8IVV8	208 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	OR2L13	Q8N349	312 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	LRRC25	Q8N386	305 aa	Predicted RBP	15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	SLC16A11	Q8NCK7	471 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	GATAD2B	Q8WXI9	593 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	TMEM203	Q969S6	136 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	TM4SF19	Q96DZ7	209 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	SMIM10	Q96HG1	83 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	JAM3	Q9BX67	310 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	MTIF3	Q9H2K0	278 aa	Known RBP	15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	TPK1	Q9H3S4	243 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	TRIM45	Q9H8W5	580 aa	Predicted RBP	15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	ABCB9	Q9NP78	766 aa		15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	ZNF443	Q9Y2A4	671 aa	Predicted RBP	15.03	■□□□□ -0
HLA-DQB2-231	ENST00000435145	TBC1D3K	A0A087X1G2	549 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	TBC1D3F	A6NER0	549 aa	Predicted RBP	15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	SLC30A4	O14863	429 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	ZNF888	P0CJ79	500 aa	Predicted RBP	15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	NDUFS1	P28331	727 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	SLC1A3	P43003	542 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	AVPR1B	P47901	424 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	RGS8	P57771	180 aa	Predicted RBP	15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	KIAA1024L	P59773	190 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	MLLT1	Q03111	559 aa	Predicted RBP	15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	MXD1	Q05195	221 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	ACSM1	Q08AH1	577 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	TBC1D3G	Q6DHY5	549 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	FAM109B	Q6ICB4	259 aa	Predicted RBP	15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	ZNF620	Q6ZNG0	422 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	MTSS1L	Q765P7	747 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	OR4E2	Q8NGC2	313 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	ADAMTS15	Q8TE58	950 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	GANC	Q8TET4	914 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	LCN9	Q8WX39	176 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	ASB12	Q8WXK4	309 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	UFD1	Q92890	307 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	RFK	Q969G6	155 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	MCHR1	Q99705	422 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	KXD1	Q9BQD3	176 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	KATNB1	Q9BVA0	655 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	MTHFD2L	Q9H903	347 aa	Predicted RBP	15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	PRDM9	Q9NQV7	894 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	EXOG	Q9Y2C4	368 aa	Known RBP	15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	NTNG1	Q9Y2I2	539 aa		15.02	■□□□□ -0
HLA-DQB2-231	ENST00000435145	DOCK8	Q8NF50	2099 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TRDV1	A0A1B0GX56	115 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	BTN3A3	O00478	584 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	AP3D1	O14617	1153 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	IGHA1	P01876	353 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SDC2	P34741	201 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SOX18	P35713	384 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CD79B	P40259	229 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	HTR3A	P46098	478 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CDH11	P55287	796 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	OR2B6	P58173	313 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	HOXC5	Q00444	222 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	FABP5	Q01469	135 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	RGS1	Q08116	209 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ASAH1	Q13510	395 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PGGHG	Q32M88	737 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ARHGAP11B	Q3KRB8	267 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PUS10	Q3MIT2	529 aa	Known RBP	15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ZNF628	Q5EBL2	1059 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	EXOSC6	Q5RKV6	272 aa	Known RBP	15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	TYW3	Q6IPR3	259 aa	Known RBP	15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	FBXO42	Q6P3S6	717 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	XKRX	Q6PP77	449 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PLEKHM3	Q6ZWE6	761 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SAMD14	Q8IZD0	417 aa	Predicted RBP	15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	KIAA1143	Q96AT1	154 aa	Predicted RBP	15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SLC41A3	Q96GZ6	507 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	FCRL4	Q96PJ5	515 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	WBP1L	Q9NX94	342 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PHF11	Q9UIL8	331 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	PCOLCE2	Q9UKZ9	415 aa		15.02	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145		A0A1W2PQL4	384 aa	Predicted RBP	15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SCAMP1	O15126	338 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	NARS	O43776	548 aa	Known RBP	15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	GDI1	P31150	447 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ZNF136	P52737	540 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ZNF155	Q12901	538 aa	Predicted RBP	15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CLEC12A	Q5QGZ9	265 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SLC30A6	Q6NXT4	461 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	RRM2B	Q7LG56	351 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	DGLUCY	Q7Z3D6	616 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	NRM	Q8IXM6	262 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ARIH2OS	Q8N7S6	290 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	GDPD1	Q8N9F7	314 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SYT14	Q8NB59	555 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	OR1E3	Q8WZA6	343 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	CDS1	Q92903	461 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	SLC35B4	Q969S0	331 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	ELSPBP1	Q96BH3	223 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	C1GALT1C1	Q96EU7	318 aa		15.01	□□□□□ -0.01
HLA-DQB2-231	ENST00000435145	NEDD4L	Q96PU5	975 aa		15.01	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms