RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 PARPBPQ9NWS1 579 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 UBP1Q9NZI7 540 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 GSKIPQ9P0R6 139 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 OPN4Q9UHM6 478 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 IKZF3Q9UKT9 509 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 DISC1C4P0D8 188 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 LRRN3E7EW58 273 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 FXYD1O00168 92 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 AGRPO00253 132 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 BRI3O95415 125 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 SFTPBP07988 381 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 HOXB5P09067 269 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 SBK3P0C264 359 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 DAOP14920 347 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 NME1P15531 152 aaKnown RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 HOXA5P20719 270 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 GADD45AP24522 165 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 MPSTP25325 297 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 PMELP40967 661 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 BTG1P62324 171 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 FAM83EQ2M2I3 478 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 ASPRV1Q53RT3 343 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 CCDC157Q569K6 752 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 CLEC6AQ6EIG7 209 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 VWA1Q6PCB0 445 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 KCTD9Q7L273 389 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 MMP21Q8N119 569 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 CELF5Q8N6W0 485 aaKnown RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 CPT1CQ8TCG5 803 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 ACOT12Q8WYK0 555 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 LPAR1Q92633 364 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 SEMA4DQ92854 862 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 EXTL1Q92935 676 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 TSNAXQ99598 290 aaKnown RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 FUZQ9BT04 418 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 DDA1Q9BW61 102 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 ARHGAP39Q9C0H5 1083 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 LRRN3Q9H3W5 708 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 ZNF430Q9H8G1 570 aaPredicted RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 NMNAT1Q9HAN9 279 aaPredicted RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 ADAP2Q9NPF8 381 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 RBFOX1Q9NWB1 397 aaKnown RBP4.93□□□□□ -1.62
HERC4-205ENST00000412272 NAGKQ9UJ70 344 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 SLC9A8Q9Y2E8 581 aa4.93□□□□□ -1.62
HERC4-205ENST00000412272 LOC100130705A0A1B0GUX0 176 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 IQCMA0A1B0GVH7 501 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 NKX6-3A6NJ46 265 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SOCS6O14544 535 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 OGG1O15527 345 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 PMP2P02689 132 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 RPLP0P05388 317 aaKnown RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 ANXA3P12429 323 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 INSRRP14616 1297 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 HLA-GP17693 338 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 CXCL3P19876 107 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 HLA-DPA1P20036 260 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 S1PR1P21453 382 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 GPX3P22352 226 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ITPKAP23677 461 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 IFNGR2P38484 337 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 MAP2K3P46734 347 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 GRIA4P48058 902 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 IDH3GP51553 393 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 DHODHQ02127 395 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 GABPAQ06546 454 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.92□□□□□ -1.62
HERC4-205ENST00000412272 CRHR2Q13324 411 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 RSU1Q15404 277 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 HIKESHIQ53FT3 197 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ABLIM2Q6H8Q1 611 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 WDR88Q6ZMY6 472 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 DPPA4Q7L190 304 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 CYP4Z1Q86W10 505 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 NPAS3Q8IXF0 933 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 MYCT1Q8N699 235 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 GPR151Q8TDV0 419 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 STYXQ8WUJ0 223 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 CORO2AQ92828 525 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ISG20Q96AZ6 181 aaKnown RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 OTULINQ96BN8 352 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 LRCH3Q96II8 777 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 RBBP8Q99708 897 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 KLHDC3Q9BQ90 382 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 YIPF4Q9BSR8 244 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 RSRP1Q9BUV0 290 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 MFRPQ9BY79 579 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 EXOSC3Q9NQT5 275 aaKnown RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 NDRG4Q9ULP0 352 aaKnown RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 CLCA3PQ9Y6N3 262 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 C6orf229H3BNL8 230 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 SCN2BO60939 215 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 OR2J2O76002 312 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 RAP2AP10114 183 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 NCF1P14598 390 aaPredicted RBP4.92□□□□□ -1.62
HERC4-205ENST00000412272 CD19P15391 556 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 ERCC2P18074 760 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 YWHAQP27348 245 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 CTSKP43235 329 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 RORCP51449 518 aa4.92□□□□□ -1.62
HERC4-205ENST00000412272 AP3S2P59780 193 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms