RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 C11orf98E9PRG8 122 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 H3BNX3 289 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 RASAL1O95294 804 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 CHRM4P08173 479 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 CTSAP10619 480 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 CHRM1P11229 460 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 FDXRP22570 491 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 NR4A2P43354 598 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 SPATS1Q496A3 300 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 OGFRL1Q5TC84 451 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 ZNF619Q8N2I2 560 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 CBARPQ8N350 705 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 UBTD2Q8WUN7 234 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 TWIST2Q8WVJ9 160 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 MRPL38Q96DV4 380 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 PIWIL1Q96J94 861 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 ZNF317Q96PQ6 595 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 OR52B2Q96RD2 323 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 SMOC2Q9H3U7 446 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 C14orf119Q9NWQ9 140 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 KIF25Q9UIL4 384 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 NOSIPQ9Y314 301 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 SLC22A23A1A5C7 686 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 ZSCAN5BA6NJL1 495 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 SAP18O00422 153 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 BCKDKO14874 412 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 GOT2P00505 430 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 SLC2A5P22732 501 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 ACTBP60709 375 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 RACK1P63244 317 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 ACTG1P63261 375 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 KCNJ11Q14654 390 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 NRF1Q16656 503 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 C11orf91Q3C1V1 193 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 C9orf152Q5JTZ5 239 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 ADGRF3Q8IZF5 1079 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 NUP43Q8NFH3 380 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 COL21A1Q96P44 957 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 INPP4AQ96PE3 977 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 POLR2J3Q9H1A7 115 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 SH3BGRL3Q9H299 93 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 GHITMQ9H3K2 345 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 RIMS4Q9H426 269 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 TBC1D17Q9HA65 648 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 RXFP3Q9NSD7 469 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 SLC2A8Q9NY64 477 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 COL3A1P02461 1466 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 FMO6PO60774 539 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 CDC123O75794 336 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 BPGMP07738 259 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 MICAQ29983 383 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 HENMT1Q5T8I9 393 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 OR52E8Q6IFG1 317 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 ZNF695Q8IW36 515 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 SPERTQ8NA61 448 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 APH1AQ96BI3 265 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 TRMT2BQ96GJ1 504 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 ARPC5LQ9BPX5 153 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 SULT4A1Q9BR01 284 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 MCOLN1Q9GZU1 580 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 CLK4Q9HAZ1 481 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 XPNPEP1Q9NQW7 623 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 NLE1Q9NVX2 485 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 FZD10Q9ULW2 581 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 HS3ST3A1Q9Y663 406 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 XIRP1Q702N8 1843 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 TNCP24821 2201 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 FOXO6A8MYZ6 492 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 RFXAPO00287 272 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 SDC3O75056 442 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 LYPLA2O95372 231 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 CRYAAP02489 173 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 AHRP35869 848 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 VEGFBP49765 207 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 RPL23AP62750 156 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 TLE4Q04727 773 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 TUBA3CQ13748 450 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 SNTB1Q13884 538 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 CARD17Q5XLA6 110 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 ZSWIM9Q86XI8 627 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 RHEBL1Q8TAI7 183 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 FANK1Q8TC84 345 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 ASB9Q96DX5 294 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 OXNAD1Q96HP4 312 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 DIRAS2Q96HU8 199 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 MRPL45Q9BRJ2 306 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 TUBA8Q9NY65 449 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 FKBPLQ9UIM3 349 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 C4AP0C0L4 1744 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 C4BP0C0L5 1744 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 SCO2O43819 266 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 RGS9O75916 674 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 SFTPDP35247 375 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 UBE2NLQ5JXB2 153 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 SFXN4Q6P4A7 337 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 ZNF574Q6ZN55 896 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 NLGN4YQ8NFZ3 816 aaPredicted RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 ADIPOR1Q96A54 375 aa4.76□□□□□ -1.65
TTC3-204ENST00000399017 TOE1Q96GM8 510 aaKnown RBP4.76□□□□□ -1.65
TTC3-204ENST00000399017 NXF5Q9H1B4 397 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms