RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 SHFQ7M4L6 423 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 RELL1Q8IUW5 271 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 ACVR1CQ8NER5 493 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 LINC01599Q8WXQ3 324 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF317Q96PQ6 595 aaPredicted RBP13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 TRIB3Q96RU7 358 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 GPN2Q9H9Y4 310 aaPredicted RBP13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 LIPT1Q9Y234 373 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 RNF215Q9Y6U7 377 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 SCN4AP35499 1836 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 WASH4PA8MWX3 477 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 ALDOAP04075 364 aaKnown RBP13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 SLC35E2BP0CK96 405 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 IL4RP24394 825 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 TUBA1BP68363 451 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 TUBA4AP68366 448 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 SF3B4Q15427 424 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 C10orf62Q5T681 223 aaPredicted RBP13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 TUBA1AQ71U36 451 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 MFSD8Q8NHS3 518 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 MMP17Q9ULZ9 603 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 KCNIP3Q9Y2W7 256 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 ST14Q9Y5Y6 855 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 SDHDO14521 159 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 TNFRSF1BP20333 461 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 GSTM2P28161 218 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 MAGEA3P43357 314 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 IST1P53990 364 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 MAB21L1Q13394 359 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 BCL2L15Q5TBC7 163 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 VHLLQ6RSH7 139 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 ENPP6Q6UWR7 440 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 FTMTQ8N4E7 242 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 RCBTB1Q8NDN9 531 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 MAN2C1Q9NTJ4 1040 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 NENFQ9UMX5 172 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 TUBA3EQ6PEY2 450 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 ELMOD2Q8IZ81 293 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 C16orf78Q8WTQ4 265 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF559Q9BR84 538 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 DYNLRB1Q9NP97 96 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 SLC6A14Q9UN76 642 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 ABCG2Q9UNQ0 655 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 ENTPD2Q9Y5L3 495 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 H7C417 338 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 HTRA2O43464 458 aaPredicted RBP13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 LCN1P31025 176 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 RSU1Q15404 277 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF773Q6PK81 442 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 HSD11B1LQ7Z5J1 315 aa13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 CIDECQ96AQ7 238 aaPredicted RBP13.47□□□□□ -0.25
PCDHA11-201ENST00000398640 CCRL2O00421 344 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 SLC19A2O60779 497 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 GSTT2P0CG29 244 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 CD27P26842 260 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 RAB15P59190 212 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 APOFQ13790 326 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 DCAF12Q5T6F0 453 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 KIAA1211LQ6NV74 962 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF551Q7Z340 670 aaPredicted RBP13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 GPR52Q9Y2T5 361 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 COL11A2P13942 1736 aaPredicted RBP13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 DLGAP1O14490 977 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 RBBP9O75884 186 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 DRD2P14416 443 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 CCL11P51671 97 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 RACK1P63244 317 aaKnown RBP13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 EEF1A1P68104 462 aaKnown RBP13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 KCNAB2Q13303 367 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 TUBA3CQ13748 450 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 GNMTQ14749 295 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 NDUFAF5Q5TEU4 345 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 C9orf135Q5VTT2 229 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 PPP1R3BQ86XI6 285 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 TMEM151AQ8N4L1 468 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 RHEBL1Q8TAI7 183 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 NPRL2Q8WTW4 380 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 ZUFSPQ96AP4 578 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 C7orf34Q96L11 122 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 C2orf42Q9NWW7 574 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 TUBA8Q9NY65 449 aaPredicted RBP13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 FADDQ13158 208 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 XKR5Q6UX68 686 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 CNN2Q99439 309 aaKnown RBP13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 CXCL16Q9H2A7 254 aa13.46□□□□□ -0.25
PCDHA11-201ENST00000398640 NSG1A0A0A6YYJ2 146 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 PVRP15151 417 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 ERV3-1Q14264 604 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 CCDC58Q4VC31 144 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 PRAMEF8Q5VWM4 474 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 PRAMEF7Q5VXH5 474 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 SLC22A12Q96S37 553 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 SERINC2Q96SA4 455 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 URM1Q9BTM9 101 aaKnown RBP13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 C14orf119Q9NWQ9 140 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 ARAP2Q8WZ64 1704 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 ACTL6BO94805 426 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 SDHBP21912 280 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 MAP4K2Q12851 820 aa13.46□□□□□ -0.26
PCDHA11-201ENST00000398640 ATP6AP1Q15904 470 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms