RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 KLHL26Q53HC5 615 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 USP53Q70EK8 1073 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 OR4N4Q8N0Y3 316 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 OR2T35Q8NGX2 323 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 RNF121Q9H920 327 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 A0A1B0GVC2 190 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 A6NIN4 97 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 ARHGAP33O14559 1287 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 FURINP09958 794 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 CBX5P45973 191 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 PFN3P60673 137 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 BCL7AQ4VC05 210 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 C6orf132Q5T0Z8 1188 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 LRFN4Q6PJG9 635 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 LMX1AQ8TE12 382 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 JSRP1Q96MG2 331 aaPredicted RBP11.73□□□□□ -0.53
SOCS6-201ENST00000397942 PRRG4Q9BZD6 226 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 SLC6A15Q9H2J7 730 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 DZANK1Q9NVP4 752 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 IL37Q9NZH6 218 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 ZNF69Q9UC07 566 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 DDX60Q8IY21 1712 aaKnown RBP11.73□□□□□ -0.53
SOCS6-201ENST00000397942 HTR3EA5X5Y0 456 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 SLCO2B1O94956 709 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 GASTP01350 101 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 ITGA3P26006 1051 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 GPR143P51810 404 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 RAB40BQ12829 278 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 CCNJQ5T5M9 372 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 PRAMEF17Q5VTA0 474 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 UBE2UQ5VVX9 321 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 ARHGAP11AQ6P4F7 1023 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 AKAP1Q92667 903 aaKnown RBP eCLIP11.73□□□□□ -0.53
SOCS6-201ENST00000397942 DUS3LQ96G46 650 aaKnown RBP11.73□□□□□ -0.53
SOCS6-201ENST00000397942 CENPOQ9BU64 300 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 G6PC3Q9BUM1 346 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 CXorf36Q9H7Y0 433 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 NUDT15Q9NV35 164 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 SERTAD3Q9UJW9 196 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 N4BP2Q86UW6 1770 aaPredicted RBP11.73□□□□□ -0.53
SOCS6-201ENST00000397942 M0R233 179 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 IGLV3-27P01718 113 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 IL7P13232 177 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 PGAM2P15259 253 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 S1PR1P21453 382 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 MMP12P39900 470 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 MCCD1P59942 119 aaPredicted RBP11.73□□□□□ -0.53
SOCS6-201ENST00000397942 SNRPD2P62316 118 aaKnown RBP11.73□□□□□ -0.53
SOCS6-201ENST00000397942 FGFBP1Q14512 234 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 TMEM69Q5SWH9 247 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 LRIF1Q5T3J3 769 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 VWA5B2Q8N398 1253 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 OR6N1Q8NGY5 312 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 OR2AJ1Q8NGZ0 328 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 SGCDQ92629 289 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 ZMYND19Q96E35 227 aaPredicted RBP11.73□□□□□ -0.53
SOCS6-201ENST00000397942 OR5M11Q96RB7 305 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 NIPSNAP1Q9BPW8 284 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 OCEL1Q9H607 264 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 TRPV4Q9HBA0 871 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 PDE7BQ9NP56 450 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 TAS2R16Q9NYV7 291 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 HCN3Q9P1Z3 774 aa11.73□□□□□ -0.53
SOCS6-201ENST00000397942 NOP16Q9Y3C1 178 aaKnown RBP11.73□□□□□ -0.53
SOCS6-201ENST00000397942 LRRTM2O43300 516 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 NDUFB2O95178 105 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 ITGBL1O95965 494 aaPredicted RBP11.72□□□□□ -0.53
SOCS6-201ENST00000397942 JUNBP17275 347 aaPredicted RBP11.72□□□□□ -0.53
SOCS6-201ENST00000397942 LCN1P31025 176 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 LIPAP38571 399 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 SLC6A11P48066 632 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 COX20Q5RI15 118 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 B3GLCTQ6Y288 498 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 PARP16Q8N5Y8 322 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 PEX11GQ96HA9 241 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 CST11Q9H112 138 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 DDX31Q9H8H2 851 aaKnown RBP11.72□□□□□ -0.53
SOCS6-201ENST00000397942 ZNF639Q9UID6 485 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 FAM155AB1AL88 458 aaPredicted RBP11.72□□□□□ -0.53
SOCS6-201ENST00000397942 FAM227AF5H4B4 570 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 WRBO00258 174 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 TIMP1P01033 207 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 ACPPP15309 386 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 ADH7P40394 386 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 SLC6A9P48067 706 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 CLDN2P57739 230 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 SLC46A3Q7Z3Q1 461 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 LIMS2Q7Z4I7 341 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 OR52E1Q8NGJ3 308 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 TMEM239Q8WW34 195 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 THRSPQ92748 146 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 ALG8Q9BVK2 526 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 MMP28Q9H239 520 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 GPN3Q9UHW5 284 aaPredicted RBP11.72□□□□□ -0.53
SOCS6-201ENST00000397942 SCP2D1Q9UJQ7 156 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 PPT2Q9UMR5 302 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 BCORQ6W2J9 1755 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 TRBV4-1A0A0J9YWV2 114 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 CEBPBP17676 345 aa11.72□□□□□ -0.53
SOCS6-201ENST00000397942 SFRP4Q6FHJ7 346 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms