RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 IL7P13232 177 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 TYRP1P17643 537 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 RHCEP18577 417 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 CPN2P22792 545 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 AZGP1P25311 298 aaKnown RBP13.37□□□□□ -0.27
CLCN4-201ENST00000380829 MPIP34949 423 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 RFX2P48378 723 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 KHKP50053 298 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 SNRPD2P62316 118 aaKnown RBP13.37□□□□□ -0.27
CLCN4-201ENST00000380829 MVKQ03426 396 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 ZMAT1Q5H9K5 638 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 SPANXN2Q5MJ10 180 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 PRSS41Q7RTY9 318 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 SLC51BQ86UW2 128 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 COMTD1Q86VU5 262 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 OR4N5Q8IXE1 308 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 AMER2Q8N7J2 671 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 FAM46DQ8NEK8 389 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 OR4D11Q8NGI4 311 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 COL26A1Q96A83 441 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 KLHDC7BQ96G42 594 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 ZNF607Q96SK3 696 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 ZFYVE21Q9BQ24 234 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 KCNS3Q9BQ31 491 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 GABARAPL3Q9BY60 117 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 OR51E2Q9H255 320 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 PRO3102Q9H379 93 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 FKBP14Q9NWM8 211 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 KCNE3Q9Y6H6 103 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 LAMA1P25391 3075 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 H0YGG7 62 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 M0R082 166 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 ZNF780AO75290 641 aaPredicted RBP13.37□□□□□ -0.27
CLCN4-201ENST00000380829 PDE9AO76083 593 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 FHP07954 510 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 CHRM4P08173 479 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 PPP2R1BP30154 601 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 ARF3P61204 181 aaPredicted RBP13.37□□□□□ -0.27
CLCN4-201ENST00000380829 SIM1P81133 766 aaPredicted RBP13.37□□□□□ -0.27
CLCN4-201ENST00000380829 HHEXQ03014 270 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 FUT5Q11128 374 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 RUNX2Q13950 521 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 UBXN2BQ14CS0 331 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 MAD2L1BPQ15013 274 aaPredicted RBP13.37□□□□□ -0.27
CLCN4-201ENST00000380829 SUZ12Q15022 739 aaKnown RBP13.37□□□□□ -0.27
CLCN4-201ENST00000380829 TMEM64Q6YI46 380 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 DEF8Q6ZN54 512 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 WDR53Q7Z5U6 358 aaPredicted RBP13.37□□□□□ -0.27
CLCN4-201ENST00000380829 RAB43Q86YS6 212 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 OR4M1Q8NGD0 313 aa13.37□□□□□ -0.27
CLCN4-201ENST00000380829 GTPBP3Q969Y2 492 aaKnown RBP13.37□□□□□ -0.27
CLCN4-201ENST00000380829 IGHV1OR15-9A0A0B4J2B8 117 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 KIR2DS5A0A0G2JLQ3 304 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 A0A0G2JNG1 304 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 KIR2DS3K7RE56 304 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 PCDHGA12O60330 932 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 BUD31P41223 144 aaPredicted RBP13.36□□□□□ -0.27
CLCN4-201ENST00000380829 CTSKP43235 329 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 LIMS1P48059 325 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 KCNJ5P48544 419 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 TNFRSF17Q02223 184 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 KIR2DS5Q14953 304 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 TAB1Q15750 504 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 TSPYL5Q86VY4 417 aaPredicted RBP13.36□□□□□ -0.27
CLCN4-201ENST00000380829 PARGQ86W56 976 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 TAGAPQ8N103 731 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 ZNF687Q8N1G0 1237 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 SFXN5Q8TD22 340 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 RSC1A1Q92681 617 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 RERGQ96A58 199 aaPredicted RBP13.36□□□□□ -0.27
CLCN4-201ENST00000380829 ELP4Q96EB1 424 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 C10orf90Q96M02 699 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 TRNT1Q96Q11 434 aaKnown RBP13.36□□□□□ -0.27
CLCN4-201ENST00000380829 PITX2Q99697 317 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 NXF2Q9GZY0 626 aaKnown RBP13.36□□□□□ -0.27
CLCN4-201ENST00000380829 QRSL1Q9H0R6 528 aaKnown RBP13.36□□□□□ -0.27
CLCN4-201ENST00000380829 GPR27Q9NS67 375 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 KCMF1Q9P0J7 381 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 PCDHGA6Q9Y5G7 932 aa13.36□□□□□ -0.27
CLCN4-201ENST00000380829 SMIM10L1P0DMW3 83 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 ANXA8P13928 327 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 M6PRP20645 277 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 MAOBP27338 520 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 C21orf33P30042 268 aaPredicted RBP13.35□□□□□ -0.27
CLCN4-201ENST00000380829 UGT2B10P36537 528 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 CRISP3P54108 245 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 GPAT3Q53EU6 434 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 TOR2AQ5JU69 321 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 TCTN3Q6NUS6 607 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 BHLHB9Q6PI77 547 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 IDO2Q6ZQW0 420 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 ENTHD1Q8IYW4 607 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 CAMKVQ8NCB2 501 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 NUP43Q8NFH3 380 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 OR56A1Q8NGH5 318 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 BAHD1Q8TBE0 780 aaPredicted RBP13.35□□□□□ -0.27
CLCN4-201ENST00000380829 ZDHHC1Q8WTX9 485 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 ZFPM2Q8WW38 1151 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 SMIM10Q96HG1 83 aa13.35□□□□□ -0.27
CLCN4-201ENST00000380829 HRASLS5Q96KN8 279 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms