RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 CACNG3O60359 315 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 PQBP1O60828 265 aaKnown RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 TCRBP04435 133 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 CPN1P15169 458 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 MAPK3P27361 379 aaPredicted RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 S100A11P31949 105 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 SDC2P34741 201 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 MECP2P51608 486 aaKnown RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 MAT1AQ00266 395 aaKnown RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 MEF2AQ02078 507 aaPredicted RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 PTPRNQ16849 979 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 SLC25A52Q3SY17 297 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 FAM126BQ8IXS8 530 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 ZNF619Q8N2I2 560 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 CPXM2Q8N436 756 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 OR4C15Q8NGM1 316 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 SNX33Q8WV41 574 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 OCSTAMPQ9BR26 566 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 DUSP16Q9BY84 665 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 CBLCQ9ULV8 474 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 NCOR1O75376 2440 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 LOC285095A0A1B0GVY8 99 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 IGHA2P01877 340 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 HPXP02790 462 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 GIPP09681 153 aaPredicted RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 ATXN1LP0C7T5 689 aaKnown RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 TYRP14679 529 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 C4BPBP20851 252 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 AHCYP23526 432 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 PTPN3P26045 913 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 CRABP1P29762 137 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 RPIAP49247 311 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 INPP1P49441 399 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 CSNK1EP49674 416 aaKnown RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 CXADRP78310 365 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 VLDLRP98155 873 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 TIAL1Q01085 375 aaKnown RBP eCLIP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 INSM1Q01101 510 aaPredicted RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 C17orf67Q0P5P2 114 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 RAB33AQ14088 237 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 ZNF239Q16600 458 aaKnown RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 CYB5R2Q6BCY4 276 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 GLT6D1Q7Z4J2 308 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 TMEM17Q86X19 198 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 NUDT13Q86X67 352 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 TGIF2LXQ8IUE1 241 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 GPR26Q8NDV2 337 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 OR6K3Q8NGY3 331 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 AP3S1Q92572 193 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 OTUB1Q96FW1 271 aaPredicted RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 TMEM169Q96HH4 297 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 PCED1BQ96HM7 432 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 LRR1Q96L50 414 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 CPPED1Q9BRF8 314 aaPredicted RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 POLDIP3Q9BY77 421 aaKnown RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 CIPCQ9C0C6 399 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 METTL17Q9H7H0 456 aaPredicted RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 TMEM161AQ9NX61 479 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 PDP1Q9P0J1 537 aaPredicted RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 NFKBIL1Q9UBC1 381 aaPredicted RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 IKZF3Q9UKT9 509 aa6.2□□□□□ -1.42
RIPK1-202ENST00000380409 ARID1BQ8NFD5 2236 aaPredicted RBP6.2□□□□□ -1.42
RIPK1-202ENST00000380409 DSPPQ9NZW4 1301 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 TMEM200CA6NKL6 621 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 RHPN2P1A8MT19 583 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 RPL36A-HNRNPH2H7BZ11 118 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 C1SP09871 688 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 MSX1P28360 303 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 THBS2P35442 1172 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 SOAT1P35610 550 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 SLC1A2P43004 574 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 CCL23P55773 120 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 MAD2L1Q13257 205 aaPredicted RBP6.19□□□□□ -1.42
RIPK1-202ENST00000380409 COL9A2Q14055 689 aaPredicted RBP6.19□□□□□ -1.42
RIPK1-202ENST00000380409 DHCR24Q15392 516 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 INPP5JQ15735 1006 aaPredicted RBP6.19□□□□□ -1.42
RIPK1-202ENST00000380409 PCID2Q5JVF3 399 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 LRIF1Q5T3J3 769 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 ATG9BQ674R7 924 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 IL27RAQ6UWB1 636 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 LINGO4Q6UY18 593 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 ETV3LQ6ZN32 361 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 ARIH2OSQ8N7S6 290 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 AVL9Q8NBF6 648 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 POF1BQ8WVV4 589 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 SLC25A28Q96A46 364 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 R3HDM4Q96D70 268 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 MALSU1Q96EH3 234 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 ELMOD3Q96FG2 381 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 PCYT2Q99447 389 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 ADAT1Q9BUB4 502 aaKnown RBP6.19□□□□□ -1.42
RIPK1-202ENST00000380409 FZD8Q9H461 694 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 GLRX2Q9NS18 164 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 C19orf12Q9NSK7 152 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 TREX1Q9NSU2 369 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 MS4A12Q9NXJ0 267 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 PPP4R1LQ9P1A2 415 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 BRWD1Q9NSI6 2320 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 SHISA3A0PJX4 238 aa6.19□□□□□ -1.42
RIPK1-202ENST00000380409 FZD7O75084 574 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms