RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 FCAMRQ8WWV6 532 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 SORBS1Q9BX66 1292 aaKnown RBP14.21□□□□□ -0.13
NPHP4-201ENST00000378156 ACTRT3Q9BYD9 372 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 ENPP5Q9UJA9 477 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 C1orf105O95561 183 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 HMGA1P17096 107 aaKnown RBP14.21□□□□□ -0.13
NPHP4-201ENST00000378156 RAB5BP61020 215 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 IGFN1Q86VF2 1251 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 COQ8AQ8NI60 647 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 NEDD4LQ96PU5 975 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 DKKL1Q9UK85 242 aa14.21□□□□□ -0.13
NPHP4-201ENST00000378156 LINC01553A4QN01 128 aa14.21□□□□□ -0.14
NPHP4-201ENST00000378156 ANTXRLA6NF34 631 aa14.21□□□□□ -0.14
NPHP4-201ENST00000378156 UNC119BA6NIH7 251 aa14.21□□□□□ -0.14
NPHP4-201ENST00000378156 C11orf98E9PRG8 122 aa14.21□□□□□ -0.14
NPHP4-201ENST00000378156 I6L893 689 aaPredicted RBP14.21□□□□□ -0.14
NPHP4-201ENST00000378156 GBX1Q14549 363 aa14.21□□□□□ -0.14
NPHP4-201ENST00000378156 SMN1Q16637 294 aaKnown RBP14.21□□□□□ -0.14
NPHP4-201ENST00000378156 LRIT3Q3SXY7 679 aa14.21□□□□□ -0.14
NPHP4-201ENST00000378156 JAGN1Q8N5M9 183 aa14.21□□□□□ -0.14
NPHP4-201ENST00000378156 ZFP41Q8N8Y5 198 aa14.21□□□□□ -0.14
NPHP4-201ENST00000378156 LMNTD1Q8N9Z9 388 aa14.21□□□□□ -0.14
NPHP4-201ENST00000378156 ZNF300Q96RE9 604 aaPredicted RBP14.21□□□□□ -0.14
NPHP4-201ENST00000378156 B3GAT2Q9NPZ5 323 aa14.21□□□□□ -0.14
NPHP4-201ENST00000378156 SH2B3Q9UQQ2 575 aa14.21□□□□□ -0.14
NPHP4-201ENST00000378156 C14orf166Q9Y224 244 aaKnown RBP14.21□□□□□ -0.14
NPHP4-201ENST00000378156 KIR2DS5A0A0G2JLQ3 304 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 A0A0G2JNG1 304 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 KIR2DS3K7RE56 304 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 DDCP20711 480 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 CERS1P27544 350 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 MAN2A2P49641 1150 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 KIR2DS5Q14953 304 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 MICAQ29983 383 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 PLEKHN1Q494U1 663 aaPredicted RBP14.2□□□□□ -0.14
NPHP4-201ENST00000378156 IQCF1Q8N6M8 205 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 SAMD12Q8N8I0 201 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 OR4K5Q8NGD3 323 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 NEIL3Q8TAT5 605 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 HHIPQ96QV1 700 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 SERINC2Q96SA4 455 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 ZBTB20Q9HC78 741 aaPredicted RBP14.2□□□□□ -0.14
NPHP4-201ENST00000378156 C13orf42A0A1B0GVH6 325 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 MRPL3P09001 348 aaKnown RBP14.2□□□□□ -0.14
NPHP4-201ENST00000378156 MSL3P1P0C860 447 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 RORAP35398 523 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 CRYZQ08257 329 aaKnown RBP14.2□□□□□ -0.14
NPHP4-201ENST00000378156 KEAP1Q14145 624 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 SLC25A25Q6KCM7 469 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 ZNF784Q8NCA9 323 aaPredicted RBP14.2□□□□□ -0.14
NPHP4-201ENST00000378156 NSMAFQ92636 917 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 SECISBP2Q96T21 854 aaKnown RBP14.2□□□□□ -0.14
NPHP4-201ENST00000378156 NMNAT1Q9HAN9 279 aaPredicted RBP14.2□□□□□ -0.14
NPHP4-201ENST00000378156 COPZ2Q9P299 210 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 RNASET2O00584 256 aaKnown RBP14.2□□□□□ -0.14
NPHP4-201ENST00000378156 CLEC3AO75596 197 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 OR7A10O76100 309 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 SBK3P0C264 359 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 S100A10P60903 97 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 AIMP2Q13155 320 aaKnown RBP14.2□□□□□ -0.14
NPHP4-201ENST00000378156 HSF5Q4G112 596 aaPredicted RBP14.2□□□□□ -0.14
NPHP4-201ENST00000378156 GPAT4Q86UL3 456 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 ZNF101Q8IZC7 436 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 OR5L2Q8NGL0 311 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 OR6N2Q8NGY6 317 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 TIMM29Q9BSF4 260 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 PLEKHA6Q9Y2H5 1048 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 SOBPA7XYQ1 873 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 NUDT7P0C024 238 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 NDUFV2P19404 249 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 DCKP27707 260 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 AGTR1P30556 359 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 PCGF2P35227 344 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 HK3P52790 923 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 CTBSQ01459 385 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 ODF4Q2M2E3 257 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 ACOT4Q8N9L9 421 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 GATAD2BQ8WXI9 593 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 LPAR4Q99677 370 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 FTSJ1Q9UET6 329 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 EPHA6Q9UF33 1036 aa14.2□□□□□ -0.14
NPHP4-201ENST00000378156 RP1L1Q8IWN7 2480 aaPredicted RBP14.19□□□□□ -0.14
NPHP4-201ENST00000378156 DLEC1Q9Y238 1755 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 SMCO3A2RU48 225 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 ZNF878C9JN71 531 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 ADAP00813 363 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 GKN3PP0CG01 181 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 PGCP20142 388 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 NUDT1P36639 197 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 MRPS21P82921 87 aaKnown RBP14.19□□□□□ -0.14
NPHP4-201ENST00000378156 ZNF765Q7L2R6 523 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 TESCQ96BS2 214 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 PITHD1Q9GZP4 211 aaPredicted RBP14.19□□□□□ -0.14
NPHP4-201ENST00000378156 EIF1AYO14602 144 aaKnown RBP14.19□□□□□ -0.14
NPHP4-201ENST00000378156 RELAQ04206 551 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 CHAF1BQ13112 559 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 PIN1Q13526 163 aaPredicted RBP14.19□□□□□ -0.14
NPHP4-201ENST00000378156 ZFP90Q8TF47 636 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 RLN3Q8WXF3 142 aa14.19□□□□□ -0.14
NPHP4-201ENST00000378156 SGCDQ92629 289 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms