RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 CGNQ9P2M7 1197 aaKnown RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 MBD2Q9UBB5 411 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 MLXQ9UH92 298 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CIDEBQ9UHD4 219 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CHMP2BQ9UQN3 213 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 RNF24Q9Y225 148 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 KIF25-AS1Q9Y6Z4 181 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 U3KQV3 271 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 A0A1B0GUL7 405 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 TRABD2BA6NFA1 517 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 WASHC1A8K0Z3 465 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 WASH3PC4AMC7 463 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 NPIPA2E9PIF3 369 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CASKO14936 926 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ALOX15BO15296 676 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CLDN3O15551 220 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 TYROBPO43914 113 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 PEX11AO75192 247 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 SH3BGRLO75368 114 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 WNT2P09544 360 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 HOXB7P09629 217 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CALCBP10092 127 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 DPP4P27487 766 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CYLC1P35663 651 aaPredicted RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 BRCC3P46736 316 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ARHGDIAP52565 204 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 HSD17B7P56937 341 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 NUCB2P80303 420 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF33BQ06732 778 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 EIF2B1Q14232 305 aaKnown RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 RAB35Q15286 201 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 C17orf58Q2M2W7 97 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 USH1GQ495M9 461 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 VWA2Q5GFL6 755 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 MS4A13Q5J8X5 152 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 FAM182AQ5T1J6 154 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 LINC00242Q5T6M2 205 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 WASH2PQ6VEQ5 465 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 HACD2Q6Y1H2 254 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 STOX1Q6ZVD7 989 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 TMUB2Q71RG4 321 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 LHFPL4Q7Z7J7 247 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 VPS36Q86VN1 386 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF573Q86YE8 665 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 EFCAB13Q8IY85 973 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 GCNT2Q8N0V5 402 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CSNK1G2-AS1Q8NCQ2 148 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 OR6T1Q8NGN1 323 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 MRAPQ8TCY5 172 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 AGAP11Q8TF27 550 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ITLN1Q8WWA0 313 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 CRYGNQ8WXF5 182 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ART4Q93070 314 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 SYAP1Q96A49 352 aaPredicted RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 PINX1Q96BK5 328 aaKnown RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 RBM18Q96H35 190 aaKnown RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ELMO2Q96JJ3 720 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 VSTM2LQ96N03 204 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 TSGA13Q96PP4 275 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF416Q9BWM5 594 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 PALMDQ9NP74 551 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 DUS2Q9NX74 493 aaKnown RBP1.61□□□□□ -2.15
VPS13A-206ENST00000376646 KLRF1Q9NZS2 232 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ZNF581Q9P0T4 197 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ARMCX1Q9P291 453 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 BLOC1S6Q9UL45 172 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 DHRS7Q9Y394 339 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 NAALAD2Q9Y3Q0 740 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 MFHAS1Q9Y4C4 1052 aa1.61□□□□□ -2.15
VPS13A-206ENST00000376646 ZSCAN5CA6NGD5 496 aaPredicted RBP1.6□□□□□ -2.15
VPS13A-206ENST00000376646 CCT8L1PA6NM43 557 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 E9PAM4 449 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 C11orf98E9PRG8 122 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 NOL3O60936 208 aaKnown RBP1.6□□□□□ -2.15
VPS13A-206ENST00000376646 IGHV3-9P01782 118 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 TSPY4P0CV99 314 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 TSPY10P0CW01 314 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 THRBP10828 461 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 KRT13P13646 458 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 TNNI3P19429 210 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 AXLP30530 894 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 DLSTP36957 453 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 ACAA2P42765 397 aaKnown RBP1.6□□□□□ -2.15
VPS13A-206ENST00000376646 RUNX3Q13761 415 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 UBE2V2Q15819 145 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 CDKN3Q16667 212 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 ATAD3CQ5T2N8 411 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 GALNT17Q6IS24 598 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 CCBE1Q6UXH8 406 aaPredicted RBP1.6□□□□□ -2.15
VPS13A-206ENST00000376646 CBWD2Q8IUF1 395 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 GRAMD2AQ8IUY3 354 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 ARL14Q8N4G2 192 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 BEST4Q8NFU0 473 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 RFESDQ8TAC1 157 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 FLVCR1-AS1Q8TAF5 88 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 ADIPOR1Q96A54 375 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 TADA1Q96BN2 335 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 HPDLQ96IR7 371 aa1.6□□□□□ -2.15
VPS13A-206ENST00000376646 TESK2Q96S53 571 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms