RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 MVB12AQ96EY5 273 aa23.89■■□□□ 1.42
CLK2-201ENST00000355560 TSC22D3Q99576 134 aa23.89■■□□□ 1.42
CLK2-201ENST00000355560 CNPPD1Q9BV87 410 aa23.89■■□□□ 1.42
CLK2-201ENST00000355560 FOLH1BQ9HBA9 442 aa23.89■■□□□ 1.42
CLK2-201ENST00000355560 RNF6Q9Y252 685 aa23.89■■□□□ 1.42
CLK2-201ENST00000355560 KIAA0513O60268 411 aa23.89■■□□□ 1.41
CLK2-201ENST00000355560 THBS1P07996 1170 aa23.89■■□□□ 1.41
CLK2-201ENST00000355560 PAX7P23759 505 aa23.89■■□□□ 1.41
CLK2-201ENST00000355560 EMDP50402 254 aa23.89■■□□□ 1.41
CLK2-201ENST00000355560 PSG6Q00889 435 aa23.89■■□□□ 1.41
CLK2-201ENST00000355560 PIGFQ07326 219 aa23.89■■□□□ 1.41
CLK2-201ENST00000355560 ZNF267Q14586 743 aaPredicted RBP23.89■■□□□ 1.41
CLK2-201ENST00000355560 SMN1Q16637 294 aaKnown RBP23.89■■□□□ 1.41
CLK2-201ENST00000355560 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.89■■□□□ 1.41
CLK2-201ENST00000355560 APH1BQ8WW43 257 aa23.89■■□□□ 1.41
CLK2-201ENST00000355560 SAP130Q9H0E3 1048 aa23.89■■□□□ 1.41
CLK2-201ENST00000355560 ZNF768Q9H5H4 540 aaKnown RBP23.89■■□□□ 1.41
CLK2-201ENST00000355560 GAREM1Q9H706 876 aa23.89■■□□□ 1.41
CLK2-201ENST00000355560 HEMK1Q9Y5R4 338 aaPredicted RBP23.89■■□□□ 1.41
CLK2-201ENST00000355560 ADAMTS20P59510 1910 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 LY6G6EA0A0G2JKS1 128 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 CPSF4LA6NMK7 179 aaKnown RBP23.88■■□□□ 1.41
CLK2-201ENST00000355560 SIGLEC6O43699 453 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 CPNE6O95741 557 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 RPS4Y1P22090 263 aaKnown RBP23.88■■□□□ 1.41
CLK2-201ENST00000355560 HOXC5Q00444 222 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 TARDBPQ13148 414 aaKnown RBP eCLIP23.88■■□□□ 1.41
CLK2-201ENST00000355560 PTGES3Q15185 160 aaKnown RBP23.88■■□□□ 1.41
CLK2-201ENST00000355560 ZNHIT3Q15649 155 aaPredicted RBP23.88■■□□□ 1.41
CLK2-201ENST00000355560 MAPK14Q16539 360 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 NLGN4XQ8N0W4 816 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 NDC1Q9BTX1 674 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 LMF2Q9BU23 707 aaKnown RBP23.88■■□□□ 1.41
CLK2-201ENST00000355560 UCK2Q9BZX2 261 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 VCX3AQ9NNX9 186 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 NECTIN3Q9NQS3 549 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 GMEB2Q9UKD1 530 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 ATXN7L1Q9ULK2 861 aaPredicted RBP23.88■■□□□ 1.41
CLK2-201ENST00000355560 U3KQA8 63 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 ADAMTS9Q9P2N4 1935 aa23.88■■□□□ 1.41
CLK2-201ENST00000355560 NPIPA5A0A0B4J1W7 369 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 NPIPA7E9PJI5 369 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 PEX12O00623 359 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 HYAL3O43820 417 aaPredicted RBP23.87■■□□□ 1.41
CLK2-201ENST00000355560 WBP4O75554 376 aaKnown RBP23.87■■□□□ 1.41
CLK2-201ENST00000355560 IFNA16P05015 189 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 CCNYL3P0C7X3 344 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 NPIPA8P0DM63 369 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 PNLIPP16233 465 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 CHMP24386 653 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 TRHRP34981 398 aaPredicted RBP23.87■■□□□ 1.41
CLK2-201ENST00000355560 KRT20P35900 424 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 PGDP52209 483 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 EEF1A1P68104 462 aaKnown RBP23.87■■□□□ 1.41
CLK2-201ENST00000355560 ZBED5Q49AG3 693 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 EIPR1Q53HC9 387 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 SPARTQ8N0X7 666 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 OR4K5Q8NGD3 323 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 NMD3Q96D46 503 aaKnown RBP23.87■■□□□ 1.41
CLK2-201ENST00000355560 AP3D1O14617 1153 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 BRINP1O60477 761 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 DBIP07108 87 aaKnown RBP23.87■■□□□ 1.41
CLK2-201ENST00000355560 MSL3P1P0C860 447 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 GSTT1P30711 240 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 GCGRP47871 477 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 RFX3P48380 749 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 RAB39AQ14964 217 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 PERM1Q5SV97 790 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 ZC3H14Q6PJT7 736 aaKnown RBP23.87■■□□□ 1.41
CLK2-201ENST00000355560 TMPRSS9Q7Z410 1059 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 NR4A3Q92570 626 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 DIO2Q92813 273 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 LANCL2Q9NS86 450 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 FGF21Q9NSA1 209 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 SCN3BQ9NY72 215 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 FTSJ1Q9UET6 329 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 KCNE5Q9UJ90 142 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 SERTAD3Q9UJW9 196 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 ERVK-19Q9WJR5 959 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 DTX4Q9Y2E6 619 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 TPRKBQ9Y3C4 175 aa23.87■■□□□ 1.41
CLK2-201ENST00000355560 PRAMEF2O60811 474 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 KCNK2O95069 426 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 CRISP1P54107 249 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 SERTAD2Q14140 314 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 PEAR1Q5VY43 1037 aaPredicted RBP23.86■■□□□ 1.41
CLK2-201ENST00000355560 TMEM71Q6P5X7 295 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 MORN4Q8NDC4 146 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 VSTM2LQ96N03 204 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 NODALQ96S42 347 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 DGCR6LQ9BY27 220 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 FANCEQ9HB96 536 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 SEMA4GQ9NTN9 838 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 REV1Q9UBZ9 1251 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 SEC16AO15027 2179 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 OSMP13725 252 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 POU1F1P28069 291 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 LSM11P83369 360 aaKnown RBP eCLIP23.86■■□□□ 1.41
CLK2-201ENST00000355560 ENTPD8Q5MY95 495 aa23.86■■□□□ 1.41
CLK2-201ENST00000355560 XAF1Q6GPH4 301 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms