RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 FAM46AQ96IP4 442 aaKnown RBP20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 MRGPRX1Q96LB2 322 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 KCNS3Q9BQ31 491 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 LYRM4Q9HD34 91 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 KRCC1Q9NPI7 259 aaPredicted RBP20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 MED17Q9NVC6 651 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 EXOSC1Q9Y3B2 195 aaKnown RBP20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 SLC22A7Q9Y694 548 aa20.81■□□□□ 0.92
NKX2-1-201ENST00000354822 TRBV23OR9-2A0A075B6M9 112 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 KDM4EB2RXH2 506 aaPredicted RBP20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 H0Y8X5 98 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 STK25O00506 426 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 SEPHS1P49903 392 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 GAS1P54826 345 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 SRP54P61011 504 aaKnown RBP20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 RUNX1T1Q06455 604 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 SLC13A2Q13183 592 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 RUNX2Q13950 521 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 EIPR1Q53HC9 387 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 LIPKQ5VXJ0 399 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 PAQR6Q6TCH4 344 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 MBOAT2Q6ZWT7 520 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 LAPTM4BQ86VI4 370 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 CDS1Q92903 461 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 C6orf106Q9H6K1 298 aaPredicted RBP20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 IL20Q9NYY1 176 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 ACTR10Q9NZ32 417 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 PILRAQ9UKJ1 303 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 CTDSP2O14595 271 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 CTSVO60911 334 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 ZIC2O95409 532 aaPredicted RBP20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 DRD1P21728 446 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 DUSP8Q13202 625 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 TYW3Q6IPR3 259 aaKnown RBP20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 TRIM73Q86UV7 250 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 FAM83FQ8NEG4 500 aaPredicted RBP20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 SLC41A3Q96GZ6 507 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 SMURF1Q9HCE7 757 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 POLMQ9NP87 494 aaPredicted RBP20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 CNIH4Q9P003 139 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 TRAPPC4Q9Y296 219 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 CA5BQ9Y2D0 317 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 ENTPD2Q9Y5L3 495 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 SPACA6W5XKT8 324 aa20.8■□□□□ 0.92
NKX2-1-201ENST00000354822 LRRC72A6NJI9 287 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 ZSCAN9O15535 394 aaPredicted RBP20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 THBS1P07996 1170 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 CPMP14384 443 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 GTF2E2P29084 291 aaKnown RBP20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 CBX3Q13185 183 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 TCEA2Q15560 299 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 FCRL6Q6DN72 434 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 EGFL6Q8IUX8 553 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 TRIM48Q8IWZ4 208 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 OR8D4Q8NGM9 314 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 ZCCHC10Q8TBK6 192 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 RSC1A1Q92681 617 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 GDF15Q99988 308 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 CLDND1Q9NY35 253 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 CDH23Q9H251 3354 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 IL1AP01583 271 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 TSPAN19P0C672 248 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 POLR2CP19387 275 aaPredicted RBP20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 TNFSF8P32971 234 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 MLLT1Q03111 559 aaPredicted RBP20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 MANEAQ5SRI9 462 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 GDF7Q7Z4P5 450 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 CACTIN-AS1Q8N1I8 211 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 ZNF655Q8N720 491 aaPredicted RBP20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 RERGQ96A58 199 aaPredicted RBP20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 FAM210AQ96ND0 272 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 ZFYVE21Q9BQ24 234 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 PIGUQ9H490 435 aa20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 C19orf53Q9UNZ5 99 aaPredicted RBP20.79■□□□□ 0.92
NKX2-1-201ENST00000354822 OR6C74A6NCV1 312 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 P2RX6O15547 441 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 AKT2P31751 481 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 ACSL1P33121 698 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 SIM1P81133 766 aaPredicted RBP20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 TPBGQ13641 420 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 PLK5Q496M5 336 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 KIAA1324Q6UXG2 1013 aaKnown RBP20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 DGLUCYQ7Z3D6 616 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 NKAIN4Q8IVV8 208 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 CLDN22Q8N7P3 220 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 NELL2Q99435 816 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 SDF2Q99470 211 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 NARSO43776 548 aaKnown RBP20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 APOA1P02647 267 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 ZCCHC12Q6PEW1 402 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 HTRA1Q92743 480 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 SNTG1Q9NSN8 517 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 TXNL4BQ9NX01 149 aaKnown RBP20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 SPIN1Q9Y657 262 aaPredicted RBP20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 HS3ST3A1Q9Y663 406 aa20.78■□□□□ 0.92
NKX2-1-201ENST00000354822 A0A087WV62 115 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 IQCMA0A1B0GVH7 501 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 FAM221BA6H8Z2 402 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 WWP2O00308 870 aa20.77■□□□□ 0.92
NKX2-1-201ENST00000354822 AQP9O43315 295 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms