RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 EFHD2Q96C19 240 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 OTUB1Q96FW1 271 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 SCMH1Q96GD3 660 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 CGREF1Q99674 301 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 FAM173AQ9BQD7 235 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 METTL7AQ9H8H3 244 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 IL1RL2Q9HB29 575 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 SLC6A13Q9NSD5 602 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 SLAMF8Q9P0V8 285 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 LIPT1Q9Y234 373 aa10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 DSPP15924 2871 aaKnown RBP10.95□□□□□ -0.66
SPTLC1-202ENST00000337841 TTLL8A6PVC2 850 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 FBP2O00757 339 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 UNC5CO95185 931 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 CRYABP02511 175 aaKnown RBP10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 CCL3P10147 92 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 CYP4B1P13584 511 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 HPGDP15428 266 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 CASP3P42574 277 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 FADDQ13158 208 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 SNTA1Q13424 505 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 ART3Q13508 389 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 GNA13Q14344 377 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 RGNQ15493 299 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 INAQ16352 499 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 ARHGAP11BQ3KRB8 267 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 SOWAHCQ53LP3 525 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 DCST2Q5T1A1 773 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 REP15Q6BDI9 236 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 SLC30A6Q6NXT4 461 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 PACS2Q86VP3 889 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 TREML1Q86YW5 311 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 SULF2Q8IWU5 870 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 FBXW8Q8N3Y1 598 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 POU5F2Q8N7G0 328 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 POGLUT1Q8NBL1 392 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 CHDHQ8NE62 594 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 OR5D16Q8NGK9 328 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 HGDQ93099 445 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 LRRC58Q96CX6 371 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 AURKBQ96GD4 344 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 ANKRD27Q96NW4 1050 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 BBC3Q96PG8 261 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 SDF2Q99470 211 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 THUMPD3Q9BV44 507 aaKnown RBP10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 ANGPTL4Q9BY76 406 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 HHATLQ9HCP6 504 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 SH2D2AQ9NP31 389 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 SDHAF3Q9NRP4 125 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 UBQLN4Q9NRR5 601 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 PLSCR2Q9NRY7 297 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 SLC25A37Q9NYZ2 338 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 VAPAQ9P0L0 249 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 CNOT11Q9UKZ1 510 aaKnown RBP10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 PCDHGA10Q9Y5H3 936 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 GMEB1Q9Y692 573 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 CHCHD2Q9Y6H1 151 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 KCNE3Q9Y6H6 103 aa10.94□□□□□ -0.66
SPTLC1-202ENST00000337841 CELSR3Q9NYQ7 3312 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 TRBV5-3A0A0A0MS03 114 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 HMGN4O00479 90 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 AIM2O14862 343 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 STX11O75558 287 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 UTS2O95399 124 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 IGKV1D-16P01601 117 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 NR2F1P10589 423 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 GPX2P18283 190 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 MNAT1P51948 309 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 DSTNP60981 165 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 KCNJ2P63252 427 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 TRMT5Q32P41 509 aaKnown RBP10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 GPAT3Q53EU6 434 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 COX20Q5RI15 118 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 CCNJQ5T5M9 372 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 HEPHL1Q6MZM0 1159 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 TMEM81Q6P7N7 255 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 CISD2Q8N5K1 135 aaKnown RBP10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 ROPN1LQ96C74 230 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 TRNT1Q96Q11 434 aaKnown RBP10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 NODALQ96S42 347 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 HOPXQ9BPY8 73 aaPredicted RBP10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 DOHHQ9BU89 302 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 HES7Q9BYE0 225 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 SERHL2Q9H4I8 314 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 POLE3Q9NRF9 147 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 KLRF1Q9NZS2 232 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 CALML5Q9NZT1 146 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 LUZP4Q9P127 313 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 AP3M1Q9Y2T2 418 aa10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.93□□□□□ -0.66
SPTLC1-202ENST00000337841 ZZEF1O43149 2961 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 DOCK10Q96BY6 2186 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 PRAMEF25A6NGN4 478 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 B8ZZF3 427 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 G3V3Y1 287 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 SCDO00767 359 aa10.92□□□□□ -0.66
SPTLC1-202ENST00000337841 FADS1O60427 444 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms