RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 ZFPM2Q8WW38 1151 aa17.7■□□□□ 0.42
RFTN1-201ENST00000334133 CHCHD3Q9NX63 227 aaKnown RBP17.7■□□□□ 0.42
RFTN1-201ENST00000334133 WDR45Q9Y484 360 aa17.7■□□□□ 0.42
RFTN1-201ENST00000334133 HEBP2Q9Y5Z4 205 aa17.7■□□□□ 0.42
RFTN1-201ENST00000334133 LOC110117498-PIK3R3F6TDL0 507 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 CASC3O15234 703 aaKnown RBP17.69■□□□□ 0.42
RFTN1-201ENST00000334133 ATP6V1G1O75348 118 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 CDRT1O95170 752 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 NDUFV2P19404 249 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 SOX18P35713 384 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 LSSP48449 732 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 CAV3P56539 151 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 FAM214AQ32MH5 1076 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 FRRS1Q6ZNA5 592 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 LAX1Q8IWV1 398 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 OR8H2Q8N162 312 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 OR4F15Q8NGB8 312 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 ANKHQ9HCJ1 492 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 KCMF1Q9P0J7 381 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 PEX16Q9Y5Y5 336 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 CSNK1G3Q9Y6M4 447 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 TAF4O00268 1085 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 AP3D1O14617 1153 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 RAB36O95755 333 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 RPS15AP62244 130 aaKnown RBP17.69■□□□□ 0.42
RFTN1-201ENST00000334133 C1DQ13901 141 aaKnown RBP17.69■□□□□ 0.42
RFTN1-201ENST00000334133 TRAM2Q15035 370 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 MAPK14Q16539 360 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 PUS10Q3MIT2 529 aaKnown RBP17.69■□□□□ 0.42
RFTN1-201ENST00000334133 FCRL6Q6DN72 434 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 OR4K14Q8NGD5 310 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 OR4Q3Q8NH05 313 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 FLVCR1-AS1Q8TAF5 88 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 RBCK1Q9BYM8 510 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 INIPQ9NRY2 104 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 SLC7A7Q9UM01 511 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 NCKAP1Q9Y2A7 1128 aa17.69■□□□□ 0.42
RFTN1-201ENST00000334133 A8MU76 341 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 HCRTR1O43613 425 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 CTSBP07858 339 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 TNFRSF17Q02223 184 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 EXOSC7Q15024 291 aaKnown RBP17.68■□□□□ 0.42
RFTN1-201ENST00000334133 DESI1Q6ICB0 168 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 TYW3Q6IPR3 259 aaKnown RBP17.68■□□□□ 0.42
RFTN1-201ENST00000334133 FIGNL1Q6PIW4 674 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 FIGLAQ6QHK4 219 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 ANKK1Q8NFD2 765 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 PROKR2Q8NFJ6 384 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 NACC2Q96BF6 587 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 C1GALT1C1Q96EU7 318 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 SCARF2Q96GP6 870 aaPredicted RBP17.68■□□□□ 0.42
RFTN1-201ENST00000334133 EVA1BQ9NVM1 165 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 UBXN7O94888 489 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 MAGEA10P43363 369 aaPredicted RBP17.68■□□□□ 0.42
RFTN1-201ENST00000334133 RPS25P62851 125 aaKnown RBP17.68■□□□□ 0.42
RFTN1-201ENST00000334133 ALG11Q2TAA5 492 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 DEFB110Q30KQ9 67 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 AGAP7PQ5VUJ5 663 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 HSDL2Q6YN16 418 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 GDF7Q7Z4P5 450 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 RPLP0P6Q8NHW5 317 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 FAM3CQ92520 227 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 SDHCQ99643 169 aaPredicted RBP17.68■□□□□ 0.42
RFTN1-201ENST00000334133 ARHGDIGQ99819 225 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 SARGQ9BW04 601 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 SMURF1Q9HCE7 757 aa17.68■□□□□ 0.42
RFTN1-201ENST00000334133 TESQ9UGI8 421 aaKnown RBP17.68■□□□□ 0.42
RFTN1-201ENST00000334133 PEX12O00623 359 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 CDC42EP2O14613 210 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 AQP9O43315 295 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 HYAL3O43820 417 aaPredicted RBP17.67■□□□□ 0.42
RFTN1-201ENST00000334133 TSPAN19P0C672 248 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 MYL12AP19105 171 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 OMPP47874 163 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 PRKCDQ05655 676 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 ST3GAL3Q11203 375 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 INSL4Q14641 139 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 SLC41A3Q96GZ6 507 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 LYARQ9NX58 379 aaKnown RBP17.67■□□□□ 0.42
RFTN1-201ENST00000334133 ACTR10Q9NZ32 417 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 STUB1Q9UNE7 303 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 ZC3H12DA2A288 527 aaKnown RBP17.67■□□□□ 0.42
RFTN1-201ENST00000334133 ALOX5P09917 674 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 ACP2P11117 423 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 MTNR1AP48039 350 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 TPMTP51580 245 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 TPTEP56180 551 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 SRP54P61011 504 aaKnown RBP17.67■□□□□ 0.42
RFTN1-201ENST00000334133 ZNF45Q02386 682 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 C1orf61Q13536 156 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 SMARCD3Q6STE5 483 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 ZNF836Q6ZNA1 936 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 ZBTB8BQ8NAP8 495 aaPredicted RBP17.67■□□□□ 0.42
RFTN1-201ENST00000334133 TMEM163Q8TC26 289 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 GNPDA2Q8TDQ7 276 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 HMGB4Q8WW32 186 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 MOAP1Q96BY2 351 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 NELL2Q99435 816 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 MARCH7Q9H992 704 aa17.67■□□□□ 0.42
RFTN1-201ENST00000334133 KLHL28Q9NXS3 571 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms