RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 OR5F1O95221 314 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 APOC1P02654 83 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 NDUFV2P19404 249 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 RAB3BP20337 219 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 AGTR1P30556 359 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 S100A11P31949 105 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 GAS1P54826 345 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 B4GALNT1Q00973 533 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 POU4F2Q12837 409 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ZSWIM7Q19AV6 140 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 DNAAF1Q8NEP3 725 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 LILRB1Q8NHL6 650 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 UPF1Q92900 1129 aaKnown RBP eCLIP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ZFP3Q96NJ6 502 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 PINK1Q9BXM7 581 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 PCBD2Q9H0N5 130 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SMG9Q9H0W8 520 aaKnown RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SLC6A17Q9H1V8 727 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 METTL17Q9H7H0 456 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 CXorf36Q9H7Y0 433 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 EVA1AQ9H8M9 152 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 MRPS7Q9Y2R9 242 aaKnown RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 KCNK7Q9Y2U2 307 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ARPC4-TTLL3A0A0A6YYG9 625 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 MPTX1A8MV57 137 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ABCD4O14678 606 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 RCBTB2O95199 551 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ETHE1O95571 254 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 RECKO95980 971 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 TFP02787 698 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 NMBP08949 121 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 FGF2P09038 288 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ALPPL2P10696 532 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 BMP7P18075 431 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 CSKP41240 450 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 FGL1Q08830 312 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 FAM214AQ32MH5 1076 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF791Q3KP31 576 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 C16orf59Q7L2K0 433 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 CHMP1BQ7LBR1 199 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 IQCF1Q8N6M8 205 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ZBTB44Q8NCP5 570 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 CLRN3Q8NCR9 226 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 OR11H4Q8NGC9 324 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF671Q8TAW3 534 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SMAP2Q8WU79 429 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 TMEM169Q96HH4 297 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 KLF16Q9BXK1 252 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 IFT22Q9H7X7 185 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 RPS6KB2Q9UBS0 482 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 A0A087WUU8 490 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 TRAV1-2A0A0B4J238 106 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SLC5A10A0PJK1 596 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 DUXAA6NLW8 204 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 NEDD8-MDP1E9PL57 170 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SMLR1H3BR10 107 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF593O00488 134 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SOX30O94993 753 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 AGR2O95994 175 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ATP1B1P05026 303 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 CD1AP06126 327 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 PPP3CBP16298 524 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SEC61A1P61619 476 aaKnown RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 LRRC32Q14392 662 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 GRIN2CQ14957 1233 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SLC8B1Q6J4K2 584 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 NXPE4Q6UWF7 544 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 USP50Q70EL3 339 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 KLBQ86Z14 1044 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 CDK20Q8IZL9 346 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 LINC00518Q8N0U6 118 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 FAM98AQ8NCA5 519 aaKnown RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SOCS4Q8WXH5 440 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 TRMT2BQ96GJ1 504 aaKnown RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 AIF1LQ9BQI0 150 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SGPP1Q9BX95 441 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ELAC1Q9H777 363 aaKnown RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 NKIRAS2Q9NYR9 191 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 TRPC4Q9UBN4 977 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 CA5BQ9Y2D0 317 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 H0YC42 278 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 RNF13O43567 381 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 FZD7O75084 574 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 TP53P04637 393 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 DGKEP52429 567 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 VSX2P58304 361 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 RPL6Q02878 288 aaKnown RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF169Q14929 603 aaPredicted RBP4.49□□□□□ -1.69
PTPN13-201ENST00000316707 MLC1Q15049 377 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 FAM26DQ5JW98 314 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 TPGS2Q68CL5 300 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SMARCD3Q6STE5 483 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 TMEM91Q6ZNR0 172 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ABI3BPQ7Z7G0 1075 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 C17orf64Q86WR6 236 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF280BQ86YH2 543 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 SYS1Q8N2H4 156 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 ELP4Q96EB1 424 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 TCEAL4Q96EI5 215 aa4.49□□□□□ -1.69
PTPN13-201ENST00000316707 KLHL15Q96M94 604 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms