RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 OR52R1Q8NGF1 315 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 MYDGFQ969H8 173 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 SLC38A4Q969I6 547 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 SPRTNQ9H040 489 aaPredicted RBP17.1■□□□□ 0.33
CCDC43-201ENST00000315286 GPN2Q9H9Y4 310 aaPredicted RBP17.1■□□□□ 0.33
CCDC43-201ENST00000315286 PDE7BQ9NP56 450 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 ENPP5Q9UJA9 477 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 SATB2Q9UPW6 733 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 UNC13CQ8NB66 2214 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 COL6A3P12111 3177 aa17.1■□□□□ 0.33
CCDC43-201ENST00000315286 GXYLT2A0PJZ3 443 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 OR2W5A6NFC9 320 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 MPZL2O60487 215 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 NSA2O95478 260 aaKnown RBP17.09■□□□□ 0.33
CCDC43-201ENST00000315286 LCKP06239 509 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 CDK1P06493 297 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 S1PR1P21453 382 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 PSMB9P28065 219 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 AFF3P51826 1226 aaKnown RBP17.09■□□□□ 0.33
CCDC43-201ENST00000315286 SKP1P63208 163 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 EEF1A1P68104 462 aaKnown RBP17.09■□□□□ 0.33
CCDC43-201ENST00000315286 MAP4K2Q12851 820 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 COX10Q12887 443 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 BNIP3Q12983 259 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 TRAM2Q15035 370 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 FIGNL1Q6PIW4 674 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 ANKRD13BQ86YJ7 626 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 METTL27Q8N6F8 245 aaPredicted RBP17.09■□□□□ 0.33
CCDC43-201ENST00000315286 NR4A3Q92570 626 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 IL4I1Q96RQ9 567 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 MCHR1Q99705 422 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 SAP130Q9H0E3 1048 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 DUSP15Q9H1R2 295 aaPredicted RBP17.09■□□□□ 0.33
CCDC43-201ENST00000315286 CACYBPQ9HB71 228 aaKnown RBP17.09■□□□□ 0.33
CCDC43-201ENST00000315286 TIMMDC1Q9NPL8 285 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 NDOR1Q9UHB4 597 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 KCNE5Q9UJ90 142 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 ARID1BQ8NFD5 2236 aaPredicted RBP17.09■□□□□ 0.33
CCDC43-201ENST00000315286 VCANP13611 3396 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 NPIPA5A0A0B4J1W7 369 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 NPIPA7E9PJI5 369 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 AP3D1O14617 1153 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 CTNSO60931 367 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 STSP08842 583 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 NPIPA8P0DM63 369 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 ZNF182P17025 639 aaPredicted RBP17.09■□□□□ 0.33
CCDC43-201ENST00000315286 OR1D5P58170 312 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 BTG2P78543 158 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 ALDH6A1Q02252 535 aaKnown RBP17.09■□□□□ 0.33
CCDC43-201ENST00000315286 ST3GAL3Q11203 375 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 STX4Q12846 297 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 C12orf73Q69YU5 71 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 PRICKLE2Q7Z3G6 844 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 MMABQ96EY8 250 aaPredicted RBP17.09■□□□□ 0.33
CCDC43-201ENST00000315286 ZDHHC12Q96GR4 267 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 RAB33BQ9H082 229 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 CAPN10Q9HC96 672 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 EPHA6Q9UF33 1036 aa17.09■□□□□ 0.33
CCDC43-201ENST00000315286 TMEM184BQ9Y519 407 aaPredicted RBP17.09■□□□□ 0.33
CCDC43-201ENST00000315286 A0A1B0GVT2 93 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 PEX12O00623 359 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 HRO43593 1189 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 BCAS1O75363 584 aaPredicted RBP17.08■□□□□ 0.33
CCDC43-201ENST00000315286 THY1P04216 161 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 THBS1P07996 1170 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 CDK4P11802 303 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 RPS4Y1P22090 263 aaKnown RBP17.08■□□□□ 0.33
CCDC43-201ENST00000315286 EPHA4P54764 986 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 AQP6Q13520 282 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 KCNAB1Q14722 419 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 CTF1Q16619 201 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 GARNL3Q5VVW2 1013 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 GALNT12Q8IXK2 581 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 SLC25A45Q8N413 288 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 B3GNT7Q8NFL0 401 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 YIPF6Q96EC8 236 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 RBM18Q96H35 190 aaKnown RBP17.08■□□□□ 0.33
CCDC43-201ENST00000315286 ALOXE3Q9BYJ1 711 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 PRTFDC1Q9NRG1 225 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 CLN6Q9NWW5 311 aa17.08■□□□□ 0.33
CCDC43-201ENST00000315286 SH3D21A4FU49 640 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 HRKO00198 91 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 ST13P50502 369 aaKnown RBP17.08■□□□□ 0.32
CCDC43-201ENST00000315286 RNF144AP50876 292 aaPredicted RBP17.08■□□□□ 0.32
CCDC43-201ENST00000315286 POU6F2P78424 691 aaPredicted RBP17.08■□□□□ 0.32
CCDC43-201ENST00000315286 ST3GAL4Q11206 333 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 ZNF155Q12901 538 aaPredicted RBP17.08■□□□□ 0.32
CCDC43-201ENST00000315286 WDR45BQ5MNZ6 344 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 UBE2UQ5VVX9 321 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 NIPAL1Q6NVV3 410 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 ZC3H14Q6PJT7 736 aaKnown RBP17.08■□□□□ 0.32
CCDC43-201ENST00000315286 PLEKHM3Q6ZWE6 761 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 NKAIN4Q8IVV8 208 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 ZNF595Q8IYB9 648 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 IQCF1Q8N6M8 205 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 OR6C4Q8NGE1 309 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 RIT1Q92963 219 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 MRPS33Q9Y291 106 aaKnown RBP17.08■□□□□ 0.32
CCDC43-201ENST00000315286 CLDN16Q9Y5I7 305 aa17.08■□□□□ 0.32
CCDC43-201ENST00000315286 SEC16AO15027 2179 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms