RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 DDCP20711 480 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 AZGP1P25311 298 aaKnown RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 RPL3P39023 403 aaKnown RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 HOXA1P49639 335 aaPredicted RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 PNLIPRP1P54315 467 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 FLI1Q01543 452 aaPredicted RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 TAP2Q03519 686 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 QPRTQ15274 297 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 OCLNQ16625 522 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 IGSF11Q5DX21 431 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 CLLU1Q5K131 121 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 PDZK1Q5T2W1 519 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 METRNLQ641Q3 311 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 PHC2Q8IXK0 858 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 DEFB119Q8N690 84 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF740Q8NDX6 193 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 CCL4L1Q8NHW4 92 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 HLA-CQ95604 372 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 TSACCQ96A04 125 aaPredicted RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZC3HAV1LQ96H79 300 aaKnown RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 GPR137Q96N19 417 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 XKR8Q9H6D3 395 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 SYNDIG1Q9H7V2 258 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 FANCFQ9NPI8 374 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 IFT46Q9NQC8 304 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 IMP3Q9NV31 184 aaKnown RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 TMCC3Q9ULS5 477 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 CYP8B1Q9UNU6 501 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 MGAT4BQ9UQ53 548 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 ANGPT4Q9Y264 503 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 TRBC2A0A5B9 178 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 GPR37L1O60883 481 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 CDRT1O95170 752 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 RECKO95980 971 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 HLA-DQB1P01920 261 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 IFNW1P05000 195 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 HBQ1P09105 142 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 AK4P27144 223 aaPredicted RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 PSMB5P28074 263 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 KIR2DL3P43628 341 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 TDGQ13569 410 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 C1DQ13901 141 aaKnown RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 PDE7AQ13946 482 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 AANATQ16613 207 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 FCRLBQ6BAA4 426 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 PTCRAQ6ISU1 281 aaPredicted RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 KIAA1161Q6NSJ0 714 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 CORO6Q6QEF8 472 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 ENPP7Q6UWV6 458 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 ANGPTL8Q6UXH0 198 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF704Q6ZNC4 412 aaPredicted RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 C12orf66Q96MD2 445 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 PELOQ9BRX2 385 aaKnown RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 TPSD1Q9BZJ3 242 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 POLR2J2Q9GZM3 115 aaKnown RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 BTBD1Q9H0C5 482 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 DPEP2Q9H4A9 486 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 TXNL4BQ9NX01 149 aaKnown RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 PLEKHB1Q9UF11 243 aaPredicted RBP9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 ACSL5Q9ULC5 683 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 CACNG2Q9Y698 323 aa9.7□□□□□ -0.86
APOBEC3F-201ENST00000308521 A0A0B4J293 547 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 SAP18O00422 153 aaKnown RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 PLA2G10O15496 165 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 PROM1O43490 865 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 HCN1O60741 890 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 C6orf47O95873 294 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 CPEP16870 476 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 MAOBP27338 520 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 GAS6Q14393 721 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 SMAD2Q15796 467 aaKnown RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 KLHL12Q53G59 568 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 EOGTQ5NDL2 527 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 SAXO2Q658L1 398 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 PDZD3Q86UT5 571 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 CDH26Q8IXH8 852 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 YIPF7Q8N8F6 280 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR8J1Q8NGP2 316 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 OR56A3Q8NH54 315 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 RNF31Q96EP0 1072 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 MSANTD3Q96H12 275 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 IL4I1Q96RQ9 567 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 INSM2Q96T92 566 aaPredicted RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 C6orf106Q9H6K1 298 aaPredicted RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 MMP17Q9ULZ9 603 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 SNX11Q9Y5W9 270 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 ABCA7Q8IZY2 2146 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 TDRD6O60522 2096 aaKnown RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 ARHGEF17Q96PE2 2063 aaPredicted RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 GNG14A0A1W2PPG7 69 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 A0A1W2PQL4 384 aaPredicted RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 CACNB4O00305 520 aaPredicted RBP9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 SCO1O75880 301 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 GBAP04062 536 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZP3P21754 424 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 POU1F1P28069 291 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 PER3P56645 1201 aa9.69□□□□□ -0.86
APOBEC3F-201ENST00000308521 ZNF91Q05481 1191 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms