RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 MKRN2Q9H000 416 aaKnown RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 MED17Q9NVC6 651 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 PLEKHB1Q9UF11 243 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 PRKAB1Q9Y478 270 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 FABP12A6NFH5 140 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 HMX3A6NHT5 357 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 KDM4EB2RXH2 506 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 FAM47E-STBD1D6RA91 191 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 EPPINO95925 133 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 CHRM4P08173 479 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 MSL3P1P0C860 447 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 AHRP35869 848 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 MTNR1AP48039 350 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 PRR5P85299 388 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 IFITM2Q01629 132 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 ACSM1Q08AH1 577 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 ENPP2Q13822 863 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 TRAM2Q15035 370 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 MRM1Q6IN84 353 aaKnown RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 METAP1DQ6UB28 335 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 NUDT18Q6ZVK8 323 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 IQCF1Q8N6M8 205 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 LINC01555Q8NAE3 123 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 TP53I13Q8NBR0 393 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 UFD1Q92890 307 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 MRGPRX1Q96LB2 322 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 ARRDC1-AS1Q9H2J1 176 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 TRIM45Q9H8W5 580 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 ANKRA2Q9H9E1 313 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 POLMQ9NP87 494 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 SNX7Q9UNH6 387 aa12.1□□□□□ -0.47
C9orf3-201ENST00000277198 SF3B6Q9Y3B4 125 aaKnown RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 SPIN1Q9Y657 262 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-201ENST00000277198 MUC22E2RYF6 1773 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 TRDV1A0A1B0GX56 115 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 A0A1W2PQL4 384 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 WWP2O00308 870 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 PLD2O14939 933 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 IDH3BO43837 385 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 LCMT2O60294 686 aaKnown RBP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 CYP7B1O75881 506 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 GALP22466 123 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 CFL1P23528 166 aaKnown RBP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 PSMB5P28074 263 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 CLCNKAP51800 687 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 ST3GAL3Q11203 375 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 SF3B4Q15427 424 aaKnown RBP eCLIP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 CEBPEQ15744 281 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 PDZK1Q5T2W1 519 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 TCEAL6Q6IPX3 200 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 PAQR6Q6TCH4 344 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 FAM131AQ6UXB0 335 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 QSOX2Q6ZRP7 698 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 SPATC1Q76KD6 591 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 BCDIN3DQ7Z5W3 292 aaKnown RBP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 COMTD1Q86VU5 262 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 OR2A1Q8NGT9 310 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 OR2L8Q8NGY9 312 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 TCEAL3Q969E4 200 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 RNFT2Q96EX2 444 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 ARHGDIGQ99819 225 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 C17orf62Q9BQA9 187 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 ARHGAP9Q9BRR9 750 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 ABCB9Q9NP78 766 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 RXFP3Q9NSD7 469 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 GMEB2Q9UKD1 530 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 SLC13A4Q9UKG4 626 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 ASB4Q9Y574 426 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 N6AMT1Q9Y5N5 214 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 A0A087WUU8 490 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 A0A1W2PQ09 198 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 GSAPA4D1B5 854 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 SSX4O60224 188 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 UBXN7O94888 489 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 HMGN2P05204 90 aaKnown RBP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 HIST1H1TP22492 207 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 BUD31P41223 144 aaPredicted RBP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 NR4A2P43354 598 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 TAS2R41P59536 307 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 HNRNPA0Q13151 305 aaKnown RBP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 SF3A2Q15428 464 aaKnown RBP12.09□□□□□ -0.47
C9orf3-201ENST00000277198 WSCD2Q2TBF2 565 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 ZNF628Q5EBL2 1059 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 ATAD3CQ5T2N8 411 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 PIP5KL1Q5T9C9 394 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 C22orf42Q6IC83 251 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 ZNF730Q6ZMV8 503 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 ZNF793Q6ZN11 406 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 SZRD1Q7Z422 152 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 TMEFF1Q8IYR6 380 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 RDH10Q8IZV5 341 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 POGLUT1Q8NBL1 392 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 ANKK1Q8NFD2 765 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 CAPSLQ8WWF8 208 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 OSTF1Q92882 214 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 TP53INP1Q96A56 240 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 DIRAS2Q96HU8 199 aa12.09□□□□□ -0.47
C9orf3-201ENST00000277198 FERD3LQ96RJ6 166 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms