RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ZNF767PQ75MW2 155 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 GLRX5Q86SX6 157 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 C17orf64Q86WR6 236 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 CCDC116Q8IYX3 515 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 GPR135Q8IZ08 494 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 GHDCQ8N2G8 530 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 SETD7Q8WTS6 366 aaKnown RBP11.62□□□□□ -0.55
NUP88-201ENST00000225696 SMG7Q92540 1137 aaKnown RBP11.62□□□□□ -0.55
NUP88-201ENST00000225696 ARMC5Q96C12 935 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 ZNF558Q96NG5 402 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 ABHD1Q96SE0 405 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 THAP7Q9BT49 309 aaPredicted RBP11.62□□□□□ -0.55
NUP88-201ENST00000225696 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.62□□□□□ -0.55
NUP88-201ENST00000225696 CDCP1Q9H5V8 836 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 EQTNQ9NQ60 294 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 PAK6Q9NQU5 681 aaPredicted RBP11.62□□□□□ -0.55
NUP88-201ENST00000225696 STMN3Q9NZ72 180 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 CBLCQ9ULV8 474 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 WNT6Q9Y6F9 365 aa11.62□□□□□ -0.55
NUP88-201ENST00000225696 CIB4A0PJX0 185 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 ANTXRLA6NF34 631 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 CACNB4O00305 520 aaPredicted RBP11.61□□□□□ -0.55
NUP88-201ENST00000225696 CDC42EP2O14613 210 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 NDUFS4O43181 175 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 EEF1E1O43324 174 aaKnown RBP11.61□□□□□ -0.55
NUP88-201ENST00000225696 OR1F1O43749 312 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 TBX19O60806 448 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 PKLRP30613 574 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 THBS2P35442 1172 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 AHRP35869 848 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 MAPK9P45984 424 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 GPR1P46091 355 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 SP3Q02447 781 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 TSPAN31Q12999 210 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 MRPL28Q13084 256 aaKnown RBP11.61□□□□□ -0.55
NUP88-201ENST00000225696 ADAM15Q13444 863 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 RNASE12Q5GAN4 147 aaKnown RBP11.61□□□□□ -0.55
NUP88-201ENST00000225696 LRRTM4Q86VH4 590 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 NATD1Q8N6N6 113 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 OR51G2Q8NGK0 314 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 TTC9Q92623 222 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 DIO2Q92813 273 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 CREB3L1Q96BA8 519 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 VWCEQ96DN2 955 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 SLC38A2Q96QD8 506 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 TRMT61BQ9BVS5 477 aaKnown RBP11.61□□□□□ -0.55
NUP88-201ENST00000225696 ENKD1Q9H0I2 346 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 ABCG5Q9H222 651 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 EPHX3Q9H6B9 360 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 HINT3Q9NQE9 182 aaKnown RBP11.61□□□□□ -0.55
NUP88-201ENST00000225696 SPHK2Q9NRA0 654 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 NUDT15Q9NV35 164 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 COQ3Q9NZJ6 369 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 MGAT4AQ9UM21 535 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 CXorf51AA0A1B0GTR3 108 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 A0A1W2PPV9 198 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 E9PI62 339 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 FCMRO60667 390 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 LRG1P02750 347 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 GSTM3P21266 225 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 PPP2R1BP30154 601 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 PER3P56645 1201 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 DSG2Q14126 1118 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 SMARCD3Q6STE5 483 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 TMEM107Q6UX40 140 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 KRT74Q7RTS7 529 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 NUDT13Q86X67 352 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 CPOQ8IVL8 374 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 NRMQ8IXM6 262 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 KLHL36Q8N4N3 616 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 ZNF655Q8N720 491 aaPredicted RBP11.61□□□□□ -0.55
NUP88-201ENST00000225696 SAMD12Q8N8I0 201 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 OR2L2Q8NH16 312 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 SUN3Q8TAQ9 357 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 GNPDA2Q8TDQ7 276 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 TMEM255BQ8WV15 326 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 TFGQ92734 400 aaPredicted RBP11.61□□□□□ -0.55
NUP88-201ENST00000225696 CCDC120Q96HB5 630 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 SMAD5Q99717 465 aaKnown RBP11.61□□□□□ -0.55
NUP88-201ENST00000225696 HCAR1Q9BXC0 346 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 HEXA-AS1Q9H8Q6 139 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 TAS2R7Q9NYW3 318 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 CLEC4AQ9UMR7 237 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 NCKAP1Q9Y2A7 1128 aa11.61□□□□□ -0.55
NUP88-201ENST00000225696 IGKV1-8A0A0C4DH67 115 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 IGHA1P01876 353 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 C8AP07357 584 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 ZNF250P15622 560 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 HK1P19367 917 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 ATP6V1E1P36543 226 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 PRMT2P55345 433 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 CLDN2P57739 230 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 TEAD2Q15562 447 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 ZNF311Q5JNZ3 666 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 C6orf132Q5T0Z8 1188 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 MTFR2Q6P444 385 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 TEX261Q6UWH6 196 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 RASSF6Q6ZTQ3 369 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 TMEM99Q8N816 258 aa11.6□□□□□ -0.55
NUP88-201ENST00000225696 LINC01555Q8NAE3 123 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms