RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 UnklQ5FWH2 727 aaKnown RBP9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Abhd13Q80UX8 337 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Prps1l1Q8C5R8 318 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Mrpl49Q9CQ40 166 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Coq5Q9CXI0 327 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Mrpl17Q9D8P4 176 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Il23aQ9EQ14 196 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 C1galt1Q9JJ06 363 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 N4bp2F8VQG7 1678 aaKnown RBP9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1084A0A1L1STZ9 313 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm364A2AFI6 671 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1234A2AVK5 314 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Clip3B9EHT4 547 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm10269G3UWD7 123 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r21K7N6Y7 853 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn2r20L7N2B1 853 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Chrnb1P09690 501 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Mapk14P47811 360 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 G6pdxQ00612 515 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 GaltQ03249 379 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 CrhbpQ60571 322 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cyp3a16Q64481 504 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pum2Q80U58 1066 aaKnown RBP9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pggt1bQ8BUY9 377 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 CenpiQ8K1K4 746 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tmem41aQ9D8U2 264 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 AspdhQ9DCQ2 287 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Psmb3Q9R1P1 205 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Fndc3c1Q6DFV6 1356 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 NalcnQ8BXR5 1738 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Lcn11A2BHR2 178 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm597E9Q8J5 896 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Matn4O89029 624 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Dusp11Q6NXK5 321 aaKnown RBP9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr305Q7TS02 319 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 NelfaQ8BG30 530 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr352Q8VGJ9 315 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Upf1Q9EPU0 1124 aaKnown RBP9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ccnl2Q9JJA7 518 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 PollQ9QXE2 573 aaKnown RBP9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rpl7a-ps3A0A140T8L1 270 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tex13aA2AFS9 377 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Wdr76A6PWY4 622 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr605E9Q838 314 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gm4847G3X946 537 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zfp955bL7N232 545 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Man2b1O09159 1013 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Capns1O88456 269 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rab5cP35278 216 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Dtx3lQ3UIR3 748 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Sim1Q61045 765 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Dio1Q61153 257 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slain1Q68FF7 579 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Q8R3Y5 413 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Nkd2Q8VE28 461 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 MrgprhQ99MT8 321 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Ms4a10Q99N03 267 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 RTRAFQ9CQE8 244 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Exosc5Q9CRA8 235 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tmem44E9Q4M0 433 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 AunipE9Q6Z5 340 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Akain1G3UWD5 69 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Opn1mwO35599 359 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 NelfeP19426 375 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gjb3P28231 270 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Gpx3P46412 226 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cd38P56528 304 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 JupQ02257 745 aaKnown RBP9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Phox2aQ62066 280 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Pex11gQ6P6M5 241 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Klhl9Q6ZPT1 617 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr503Q7TRU8 323 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 A730061H03RikQ8BGD2 154 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Npas4Q8BGD7 802 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Chrnb3Q8BMN3 464 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Q8C3W1 322 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Tmem163Q8C996 288 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Kctd20Q8CDD8 419 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1395Q8VGD7 317 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr669Q8VGU9 317 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Lgals2Q9CQW5 130 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Slc6a19Q9D687 634 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Sgk2Q9QZS5 367 aa9.66□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zfp992B1ASD8 573 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zfp712E9PXJ4 705 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Hoxa10P31310 416 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Rab11bP46638 218 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Xrcc1Q60596 631 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Elfn2Q68FM6 823 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Olfr1385Q7TQT1 309 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Trim23Q8BGX0 574 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Cars2Q8BYM8 551 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Itpk1Q8BYN3 419 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Zfp991Q8R1N3 573 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 AspaQ8R3P0 312 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Q9CWU4 180 aaKnown RBP9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Actl11Q9D5V1 1207 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Dapl1Q9D757 107 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Hcar2Q9EP66 360 aa9.65□□□□□ -0.86
Ubr1-201ENSMUST00000028728 Vmn1r29Q9EQ41 303 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms