RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Fam109aQ8BH49 266 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Arhgap22Q8BL80 702 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm9881Q8BR56 211 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 B4gat1Q8BWP8 415 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Pithd1Q8BWR2 211 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Chrna3Q8R4G9 499 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gtf2h3Q8VD76 309 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Senp8Q9D2Z4 221 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Pop7Q9DCH2 140 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Nacc2Q9DCM7 586 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Fgf20Q9ESL9 211 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 PrkraQ9WTX2 313 aaKnown RBP17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cldn6Q9Z262 219 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Spin2-ps6A0A140T8V2 174 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Ssc4dA1L0T3 586 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Zfp981A2A8V7 445 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm20547B8JJN0 1276 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Gm8973D3YX71 104 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr605E9Q838 314 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Zfp605E9QAH2 694 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 CfbP04186 761 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Zfp60P16374 707 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Tra2bP62996 288 aaKnown RBP17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 SmsP97355 366 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Kdm4dQ3U2K5 510 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Dcp1bQ3U564 578 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Pabpc2Q62029 628 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Olfr855Q7TRF8 312 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Acat3Q80X81 397 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 St7lQ8K4P7 559 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 C1qtnf12Q8R2Z0 308 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Kiss1rQ91V45 396 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Fitm1Q91V79 292 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Klhl22Q99JN2 634 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cers5Q9D6K9 414 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Cib4Q9D9N5 185 aa17.65■□□□□ 0.42
Shkbp1-201ENSMUST00000003857 Il17dA0A0B4J1G4 205 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Olfr396-ps1A0A0U1RNF5 211 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 DdostO54734 441 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Spag8Q3V0Q6 470 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Znf592Q8BHZ4 1262 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Gen1Q8BMI4 908 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Nmral1Q8K2T1 309 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Ptcd2Q8R3K3 381 aaKnown RBP17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Ncbp2Q9CQ49 156 aaKnown RBP17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Lpcat2bQ9D5U0 516 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Capns2Q9D7J7 247 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Fbxl12Q9EPX5 326 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Khdrbs3Q9R226 346 aaKnown RBP17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Ccl26F8VQM2 93 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Vmn2r75G5E8Z7 853 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Vmn2r95L7N274 845 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Nmur1O55040 428 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Cd80Q00609 306 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Mup20Q5FW60 181 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 PmlQ60953 885 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Dtx4Q6PDK8 616 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Tm9sf4Q8BH24 643 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Mterf4Q8BVN4 346 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Ccdc187Q8C5V8 958 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Galnt18Q8K1B9 622 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Mptx1Q8R1M8 219 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Olfr853Q8VGG6 305 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Rab40bQ8VHP8 278 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Exo5Q9CXP9 373 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Med18Q9CZ82 208 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 ItpaQ9D892 198 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Lgi1Q9JIA1 557 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 UxtQ9WTZ0 157 aa17.64■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Ssxa1B1AUS7 101 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Gm2956E9PVJ0 216 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Gm5796E9Q7M8 205 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Gm21915J3QPM7 133 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Gm3629K7N6Y2 205 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Gm10340K7N708 205 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Lire1P11260 357 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 AcrP23578 436 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 VegfbP49766 207 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Atp6v1e1P50518 226 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Dbx1P52950 335 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Brf2Q3UAW9 420 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Tas2r110Q7M712 333 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Adamtsl2Q7TSK7 957 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Acsm4Q80W40 580 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Fam92aQ8BP22 355 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Kcnmb1Q8CAE3 191 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Lgi4Q8K1S1 537 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Ahsa2Q8N9S3 331 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Vmn1r219Q8R271 312 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Osgin1Q8VC10 478 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Pcyt2Q922E4 404 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Gimap3Q99MI6 301 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Ccdc107Q9DCC3 242 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Sars2Q9JJL8 518 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Pole3Q9JKP7 145 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Cacna1dQ99246 2179 aa17.63■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Syn1O88935 706 aa17.62■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 S100a6P14069 89 aa17.62■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Adrb1P34971 466 aa17.62■□□□□ 0.41
Shkbp1-201ENSMUST00000003857 Igfbp2P47877 305 aa17.62■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms