RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 HNRNPCL2B2RXH8 293 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 HNRNPCL3B7ZW38 293 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 MYL12BO14950 172 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 RAB36O95755 333 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 HNRNPCL4P0DMR1 293 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 BCL6P41182 706 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 RORCP51449 518 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 STARD6P59095 220 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 GPR19Q15760 415 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 ALG11Q2TAA5 492 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 SZRD1Q7Z422 152 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 ADCK2Q7Z695 626 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 MRGPREQ86SM8 312 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 IQCF1Q8N6M8 205 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 OR52E1Q8NGJ3 308 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 OR52I1Q8NGK6 324 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 OR9Q1Q8NGQ5 310 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 SETD6Q8TBK2 473 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 NR4A3Q92570 626 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 EXOSC4Q9NPD3 245 aaKnown RBP13.78□□□□□ -0.2
CDH1-213ENST00000612417 KLHL20Q9Y2M5 609 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 SYT5O00445 386 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 TLX2O43763 284 aaPredicted RBP13.78□□□□□ -0.2
CDH1-213ENST00000612417 GUCY1B2O75343 617 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 EML2O95834 649 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 APOA1P02647 267 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 EIF2S1P05198 315 aaKnown RBP13.78□□□□□ -0.2
CDH1-213ENST00000612417 FHP07954 510 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 CPEP16870 476 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 HIST1H1TP22492 207 aaPredicted RBP13.78□□□□□ -0.2
CDH1-213ENST00000612417 AHRP35869 848 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 SMSP52788 366 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 GINS1Q14691 196 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 C3orf38Q5JPI3 329 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 BCDIN3DQ7Z5W3 292 aaKnown RBP13.78□□□□□ -0.2
CDH1-213ENST00000612417 IQCHQ86VS3 1027 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 DEFB119Q8N690 84 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 OR56A1Q8NGH5 318 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 TMCO6Q96DC7 493 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 MS4A6EQ96DS6 147 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 TRMT61AQ96FX7 289 aaKnown RBP13.78□□□□□ -0.2
CDH1-213ENST00000612417 ZNF582Q96NG8 517 aaPredicted RBP13.78□□□□□ -0.2
CDH1-213ENST00000612417 NELL2Q99435 816 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 KLHL31Q9H511 634 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 PRDM7Q9NQW5 492 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 SSR3Q9UNL2 185 aa13.78□□□□□ -0.2
CDH1-213ENST00000612417 IRGMA1A4Y4 181 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 C4orf51C9J302 202 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 PRICKLE3O43900 615 aaPredicted RBP13.77□□□□□ -0.21
CDH1-213ENST00000612417 TNFP01375 233 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 HMGN2P05204 90 aaKnown RBP13.77□□□□□ -0.21
CDH1-213ENST00000612417 SERPIND1P05546 499 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 GAS1P54826 345 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 COPZ1P61923 177 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 ABATP80404 500 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 BNC1Q01954 994 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 ZP2Q05996 745 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 SLAMF1Q13291 335 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 BCL2A1Q16548 175 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 ZNF542PQ5EBM4 170 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 ACSM5Q6NUN0 579 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 ABHD17CQ6PCB6 329 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 ABI3BPQ7Z7G0 1075 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 GJD3Q8N144 294 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 SCAIQ8N9R8 606 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 JPH3Q8WXH2 748 aaPredicted RBP13.77□□□□□ -0.21
CDH1-213ENST00000612417 CNRIP1Q96F85 164 aaPredicted RBP13.77□□□□□ -0.21
CDH1-213ENST00000612417 LRR1Q96L50 414 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 GPA33Q99795 319 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 FBXW2Q9UKT8 454 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 RABL2BQ9UNT1 228 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 V9GYH0 126 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 COL6A3P12111 3177 aa13.77□□□□□ -0.21
CDH1-213ENST00000612417 IGHV1OR15-9A0A0B4J2B8 117 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 A0A1W2PR48 441 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 ERI3O43414 337 aaKnown RBP13.76□□□□□ -0.21
CDH1-213ENST00000612417 ASNA1O43681 348 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 IL1AP01583 271 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 THEGLP0DJG4 465 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 ATP5A1P25705 553 aaKnown RBP13.76□□□□□ -0.21
CDH1-213ENST00000612417 TSFMP43897 325 aaKnown RBP13.76□□□□□ -0.21
CDH1-213ENST00000612417 PSPHP78330 225 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 ILF3Q12906 894 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDH1-213ENST00000612417 LASP1Q14847 261 aaKnown RBP13.76□□□□□ -0.21
CDH1-213ENST00000612417 CEBPEQ15744 281 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 KCNJ8Q15842 424 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 KLHL22Q53GT1 634 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 PAQR6Q6TCH4 344 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 SLC22A18ASQ8N1D0 253 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 ACOT4Q8N9L9 421 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 OR2L5Q8NG80 312 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 ASB15Q8WXK1 588 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 OR2A14Q96R47 310 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 TBC1D17Q9HA65 648 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 SLC6A20Q9NP91 592 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 MRPS30Q9NP92 439 aaKnown RBP13.76□□□□□ -0.21
CDH1-213ENST00000612417 FGF20Q9NP95 211 aaPredicted RBP13.76□□□□□ -0.21
CDH1-213ENST00000612417 ISYNA1Q9NPH2 558 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 NPAP1Q9NZP6 1156 aa13.76□□□□□ -0.21
CDH1-213ENST00000612417 CES1P1Q9UKY3 287 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms