RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 SPON1Q9HCB6 807 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TCF7L1Q9HCS4 588 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SERHLQ9NQF3 203 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 DNAJC11Q9NVH1 559 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TMLHEQ9NVH6 421 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 PIH1D1Q9NWS0 290 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ASB6Q9NWX5 421 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 KCTD5Q9NXV2 234 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SPHK1Q9NYA1 384 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SEC14L3Q9UDX4 400 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 MALT1Q9UDY8 824 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 GIMAP2Q9UG22 337 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 RGS17Q9UGC6 210 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TESQ9UGI8 421 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 FBXW11Q9UKB1 542 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 PCTPQ9UKL6 214 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 NEU3Q9UQ49 428 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 MGAT4BQ9UQ53 548 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 TNFSF13BQ9Y275 285 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 CA5BQ9Y2D0 317 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 PCDHB7Q9Y5E2 793 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 NPFFR2Q9Y5X5 522 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 V9GYQ6 96 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 DSPPQ9NZW4 1301 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 LTBP1Q14766 1721 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 COL14A1Q05707 1796 aaKnown RBP3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 BTAF1O14981 1849 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 ZNF236Q9UL36 1845 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SCN8AQ9UQD0 1980 aa3.83□□□□□ -1.8
HMGB1P50-201ENST00000605814 SBF1O95248 1867 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 LTBP4Q8N2S1 1624 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 TRAV19A0A0A6YYK7 116 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 IGKV6-21A0A0C4DH24 114 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 PRAMEF33A0A0G2JMD5 474 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 LOC102723532A0A0G2JNH3 316 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 A0A0G2JPF8 293 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 TMEM129A0AVI4 362 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 OR2M5A3KFT3 312 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 KLRG2A4D1S0 409 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 NAP1L6A6NFF2 107 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 C5orf52A6NGY3 159 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 DDTLA6NHG4 134 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 SNRPGP15A8MWD9 76 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 MYO1GB0I1T2 1018 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 HNRNPCL3B7ZW38 293 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 C9JVG2 144 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 HAS3O00219 553 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 TNFRSF11BO00300 401 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 E2F3O00716 465 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 MAN2B1O00754 1011 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 KIAA0355O15063 1070 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 PPM1DO15297 605 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 RGS14O43566 566 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 HPGDSO60760 199 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 PRAMEF10O60809 474 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 SDC3O75056 442 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 CSO75390 466 aaKnown RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 STX11O75558 287 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 CRCPO75575 148 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 GRAP2O75791 330 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 EIF3GO75821 320 aaKnown RBP eCLIP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 ATG12O94817 140 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 AP2A2O94973 939 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 POP4O95707 220 aaKnown RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 POMCP01189 267 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 JCHAINP01591 159 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 RLN2P04090 185 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 SOD2P04179 222 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 HIST1H2ABP04908 130 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 EDN1P05305 212 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 HOXC4P09017 264 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 HSMCR30P0CW71 290 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 HNRNPCL4P0DMR1 293 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 SLC2A1P11166 492 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 SELLP14151 372 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 PPP3CBP16298 524 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 ENGP17813 658 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 RHCEP18577 417 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 CD53P19397 219 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 CXCL3P19876 107 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 NPR2P20594 1047 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 PPIBP23284 216 aaKnown RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 AZGP1P25311 298 aaKnown RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 ATP5A1P25705 553 aaKnown RBP3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 GABRA5P31644 462 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 S100A11P31949 105 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 BTCP35070 178 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 CSKP41240 450 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 CASP2P42575 452 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 PIK3CGP48736 1102 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 INPP1P49441 399 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 MEOX1P50221 254 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 P2RY4P51582 365 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 AKR1D1P51857 326 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 PGGT1BP53609 377 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 CRISP1P54107 249 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 CDKN2DP55273 166 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 SOX10P56693 466 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 ERVPABLB-1P60509 514 aa3.82□□□□□ -1.8
HMGB1P50-201ENST00000605814 AP1S1P61966 158 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms