RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 PEBP1P30086 187 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 OMPP47874 163 aa18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 TGM3Q08188 693 aa18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 DMPKQ09013 629 aa18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 TRAM2Q15035 370 aa18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 PDZK1Q5T2W1 519 aa18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 XKRXQ6PP77 449 aa18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 NKAIN4Q8IVV8 208 aa18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 OR2L3Q8NG85 312 aa18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 SMARCD2Q92925 531 aa18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 DMRTB1Q96MA1 342 aa18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 DCLRE1CQ96SD1 692 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 C11orf54Q9H0W9 315 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 C6orf106Q9H6K1 298 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-225ENST00000600733 A0A1W2PP55 124 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 SNTNA6NMZ2 147 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 KDM4EB2RXH2 506 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 EMC8O43402 210 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 FCMRO60667 390 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 TRIM23P36406 574 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 CST6Q15828 149 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 PYDC2Q56P42 97 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 RRM2BQ7LG56 351 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 DGLUCYQ7Z3D6 616 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 OR4Q3Q8NH05 313 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 FGF13Q92913 245 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 ELP4Q96EB1 424 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 ARHGDIGQ99819 225 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 ARHGAP9Q9BRR9 750 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 APOBEC3BQ9UH17 382 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 ZFR2Q9UPR6 939 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 LINC01553A4QN01 128 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 GABRA5P31644 462 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 IFNGR2P38484 337 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 GPR4P46093 362 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 CDH11P55287 796 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 ASAH1Q13510 395 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 PDGFRLQ15198 375 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 DUSP6Q16828 381 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 HSDL2Q6YN16 418 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 RASSF6Q6ZTQ3 369 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 HDDC3Q8N4P3 179 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 ZNF513Q8N8E2 541 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 MED18Q9BUE0 208 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 SLC22A4Q9H015 551 aa18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 EXOSC1Q9Y3B2 195 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-225ENST00000600733 A6NL46 340 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 SYT5O00445 386 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 POLR1CO15160 346 aaPredicted RBP18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 PRICKLE3O43900 615 aaPredicted RBP18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 CSF2P04141 144 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 CCNYL3P0C7X3 344 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 MPIP34949 423 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 SLC1A3P43003 542 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 TCEA2Q15560 299 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 TBRG1Q3YBR2 411 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 C16orf62Q7Z3J2 963 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 ADGRD2Q7Z7M1 963 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 ZNF485Q8NCK3 441 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 GIMAP4Q9NUV9 329 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 WDR70Q9NW82 654 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 COMMD3Q9UBI1 195 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 LIPT1Q9Y234 373 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 TRANK1O15050 2925 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 IRGMA1A4Y4 181 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 PROM1O43490 865 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 GUCY1B2O75343 617 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 PDX1P52945 283 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 ST3GAL3Q11203 375 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 INSL4Q14641 139 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 ATP6V1C2Q8NEY4 427 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 BBS1Q8NFJ9 593 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 PIGXQ8TBF5 258 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 MOAP1Q96BY2 351 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 ZNF681Q96N22 645 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 FCRL4Q96PJ5 515 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 TMED9Q9BVK6 235 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 BTBD1Q9H0C5 482 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 PHPT1Q9NRX4 125 aaPredicted RBP18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 SNX7Q9UNH6 387 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 GPSM3Q9Y4H4 160 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 C2orf16Q68DN1 1984 aa18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 RANBP2P49792 3224 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-225ENST00000600733 GPR89AB7ZAQ6 455 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 NARSO43776 548 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 PIP5K1CO60331 668 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 KAT7O95251 611 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 THY1P04216 161 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 CEACAM5P06731 702 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 GPR89BP0CG08 455 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 MYOGP15173 224 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 SOX9P48436 509 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 SNRPNP63162 240 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 LRRC32Q14392 662 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 ZFP69Q49AA0 526 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 ZNF628Q5EBL2 1059 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 PRAMEF8Q5VWM4 474 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 PRAMEF7Q5VXH5 474 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 NRMQ8IXM6 262 aa18.93■□□□□ 0.62
SHKBP1-225ENST00000600733 GDPD1Q8N9F7 314 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms