RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 RPS19P39019 145 aaKnown RBP13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 MTNR1AP48039 350 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 PSPHP78330 225 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 EFNB1P98172 346 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 DSG2Q14126 1118 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 LARS2Q15031 903 aaKnown RBP13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 CEBPEQ15744 281 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 TBC1D3GQ6DHY5 549 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 DESI1Q6ICB0 168 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 ZNF730Q6ZMV8 503 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 GET4Q7L5D6 327 aaPredicted RBP13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 ZER1Q7Z7L7 766 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 HDDC3Q8N4P3 179 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 NUP43Q8NFH3 380 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 GAL3ST3Q96A11 431 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 RSPRY1Q96DX4 576 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 NELL2Q99435 816 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 C1QTNF2Q9BXJ5 285 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 SLC22A4Q9H015 551 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 MTHFD2LQ9H903 347 aaPredicted RBP13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 ANKRA2Q9H9E1 313 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 ZDHHC4Q9NPG8 344 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 PRDM7Q9NQW5 492 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 IMP3Q9NV31 184 aaKnown RBP13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 SLC17A4Q9Y2C5 497 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 STON1Q9Y6Q2 735 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 USP24Q9UPU5 2620 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 FANCMQ8IYD8 2048 aa13.18□□□□□ -0.3
NEDD4L-223ENST00000588516 FAM208BQ5VWN6 2430 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 HTR3EA5X5Y0 456 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 FAM170BA6NMN3 283 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 KDM4EB2RXH2 506 aaPredicted RBP13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 M0R3H8 397 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 LCMT2O60294 686 aaKnown RBP13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 B4GALT2O60909 372 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 UBXN7O94888 489 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 HMGN2P05204 90 aaKnown RBP13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 CKMT1AP12532 417 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 F3P13726 295 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 S100A1P23297 94 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 FPR3P25089 353 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 GTF2E2P29084 291 aaKnown RBP13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 GABRA5P31644 462 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 BCL6P41182 706 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 TNFRSF4P43489 277 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 PRKAG1P54619 331 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 OR2B6P58173 313 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 PPP3R1P63098 170 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 ACSM1Q08AH1 577 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 SELENBP1Q13228 472 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 GPR50Q13585 617 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 ENPP2Q13822 863 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 LRRC32Q14392 662 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 IRF4Q15306 451 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 FAM214AQ32MH5 1076 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 PDZK1Q5T2W1 519 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 AGBL4Q5VU57 503 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 SDE2Q6IQ49 451 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 RPL13AP3Q6NVV1 102 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 GDPD3Q7L5L3 318 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 SNX29P2Q8IUI4 249 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 PEX5LQ8IYB4 626 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 FAM181AQ8N9Y4 354 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 LMNTD1Q8N9Z9 388 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 LINC01555Q8NAE3 123 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 PSD4Q8NDX1 1056 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 FAM83FQ8NEG4 500 aaPredicted RBP13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 ADAMTS15Q8TE58 950 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 ACOT11Q8WXI4 607 aaPredicted RBP13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 TP53INP1Q96A56 240 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 RNFT2Q96EX2 444 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 OR7D2Q96RA2 312 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 JAM3Q9BX67 310 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 SAP130Q9H0E3 1048 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 ABCG4Q9H172 646 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 SERHL2Q9H4I8 314 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 POLE4Q9NR33 117 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 SNTG1Q9NSN8 517 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 NTMQ9P121 344 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 SCML1Q9UN30 329 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 SPIN1Q9Y657 262 aaPredicted RBP13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 PKD1L2Q7Z442 2459 aa13.17□□□□□ -0.3
NEDD4L-223ENST00000588516 TRDV1A0A1B0GX56 115 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 M0R129 80 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 CTDSP2O14595 271 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 MID1O15344 667 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 PROM1O43490 865 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 LAMTOR5O43504 91 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 AKAP8O43823 692 aaKnown RBP13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 PRICKLE3O43900 615 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 PRKYO43930 277 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 CCNKO75909 580 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 HLA-DPB1P04440 258 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 TP53P04637 393 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 CHRM4P08173 479 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 PSMB5P28074 263 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 DRD3P35462 400 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 OPRD1P41143 372 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 CASP3P42574 277 aa13.16□□□□□ -0.3
NEDD4L-223ENST00000588516 BDH1Q02338 343 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms