RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 HBA1P69905 142 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 ALDH6A1Q02252 535 aaKnown RBP10.14□□□□□ -0.79
CHD3-216ENST00000573936 GAB1Q13480 694 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 TP53BP2Q13625 1128 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 NNATQ16517 81 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 DECR1Q16698 335 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 METTL21CQ5VZV1 264 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 TMEM81Q6P7N7 255 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 PRR22Q8IZ63 422 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 TRIML2Q8N7C3 387 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 ZFP62Q8NB50 900 aaPredicted RBP10.14□□□□□ -0.79
CHD3-216ENST00000573936 OR10G3Q8NGC4 313 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 OR5M3Q8NGP4 307 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 RFWD2Q8NHY2 731 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 SPPL2AQ8TCT8 520 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 NR4A3Q92570 626 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 SLC9A6Q92581 669 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 HOXB13Q92826 284 aaPredicted RBP10.14□□□□□ -0.79
CHD3-216ENST00000573936 TMBIM1Q969X1 311 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 GIMAP5Q96F15 307 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 SLC35A4Q96G79 324 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 TEX37Q96LM6 180 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 CCDC115Q96NT0 180 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 COL21A1Q96P44 957 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 OR52E6Q96RD3 313 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 TAAR6Q96RI8 345 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 STACQ99469 402 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 ACTRT3Q9BYD9 372 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 FAM107BQ9H098 131 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 RMND5AQ9H871 391 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 EQTNQ9NQ60 294 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 OLAHQ9NV23 265 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 GIN1Q9NXP7 522 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 FAF1Q9UNN5 650 aaPredicted RBP10.14□□□□□ -0.79
CHD3-216ENST00000573936 PCDHGB3Q9Y5G1 929 aa10.14□□□□□ -0.79
CHD3-216ENST00000573936 CHCHD2Q9Y6H1 151 aaPredicted RBP10.14□□□□□ -0.79
CHD3-216ENST00000573936 ANKRD17O75179 2603 aaKnown RBP10.13□□□□□ -0.79
CHD3-216ENST00000573936 CROCCQ5TZA2 2017 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 A0A0G2JND7 137 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 DUXAA6NLW8 204 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 ACOT7O00154 380 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 HS6ST1O60243 411 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 TSPAN2O60636 221 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 SEMA7AO75326 666 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 NKX2-2O95096 273 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 SNX4O95219 450 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 HMGN2P05204 90 aaKnown RBP10.13□□□□□ -0.79
CHD3-216ENST00000573936 CCL3P10147 92 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 EDN3P14138 238 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 NCF2P19878 526 aaPredicted RBP10.13□□□□□ -0.79
CHD3-216ENST00000573936 LCN1P31025 176 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 PIGAP37287 484 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 MAP3K8P41279 467 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 DGKQP52824 942 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 ARFIP2P53365 341 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 CORO7P57737 925 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 FBXW4P57775 412 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 KCNK10P57789 538 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 GPR85P60893 370 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 PHC1P78364 1004 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 PLGLB1Q02325 96 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 SNTA1Q13424 505 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 ELOAQ14241 798 aaKnown RBP10.13□□□□□ -0.79
CHD3-216ENST00000573936 SQLEQ14534 574 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 LASP1Q14847 261 aaKnown RBP10.13□□□□□ -0.79
CHD3-216ENST00000573936 KRTCAP3Q53RY4 240 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 ZNF324BQ6AW86 544 aaPredicted RBP10.13□□□□□ -0.79
CHD3-216ENST00000573936 MFSD12Q6NUT3 480 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 SLC30A6Q6NXT4 461 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 CDC73Q6P1J9 531 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 PAOXQ6QHF9 649 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 NPSR1Q6W5P4 371 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 BNC2Q6ZN30 1099 aaPredicted RBP10.13□□□□□ -0.79
CHD3-216ENST00000573936 C6orf120Q7Z4R8 191 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 CPLX4Q7Z7G2 160 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 CLECL1Q8IZS7 167 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 OR2M7Q8NG81 312 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 GOT1L1Q8NHS2 421 aaPredicted RBP10.13□□□□□ -0.79
CHD3-216ENST00000573936 PRR7Q8TB68 274 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 GPR151Q8TDV0 419 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 ADAMTS15Q8TE58 950 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 DIO2Q92813 273 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 HGDQ93099 445 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 FRMD6Q96NE9 622 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 PANX1Q96RD7 426 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 NSRP1Q9H0G5 558 aaKnown RBP10.13□□□□□ -0.79
CHD3-216ENST00000573936 IL1RL2Q9HB29 575 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 DUSP22Q9NRW4 184 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 CNOT11Q9UKZ1 510 aaKnown RBP10.13□□□□□ -0.79
CHD3-216ENST00000573936 BOKQ9UMX3 212 aaPredicted RBP10.13□□□□□ -0.79
CHD3-216ENST00000573936 NTNG1Q9Y2I2 539 aa10.13□□□□□ -0.79
CHD3-216ENST00000573936 RNF103-CHMP3A0A140T963 221 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 RFXANKO14593 260 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 UGT2B11O75310 529 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 NME6O75414 186 aaPredicted RBP10.12□□□□□ -0.79
CHD3-216ENST00000573936 IL33O95760 270 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 AGR2O95994 175 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 RNF224P0DH78 156 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 ZNF24P17028 368 aa10.12□□□□□ -0.79
CHD3-216ENST00000573936 MATN1P21941 496 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms