RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	TBC1D20	Q96BZ9	403 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	ZNF354B	Q96LW1	612 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	LPAR4	Q99677	370 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	UTP23	Q9BRU9	249 aa	Known RBP	6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	NAT9	Q9BTE0	207 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	CDCP1	Q9H5V8	836 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	LRFN1	Q9P244	771 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	C11orf21	Q9P2W6	132 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	COPG2	Q9UBF2	871 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	TEKT2	Q9UIF3	430 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	NPIPA1	Q9UND3	350 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	SLC22A14	Q9Y267	594 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	SNX24	Q9Y343	169 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	CPAMD8	Q8IZJ3	1885 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	FBN2	P35556	2912 aa		6.55	□□□□□ -1.36
MARK3-223	ENST00000561071	PABPN1L	A6NDY0	278 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	NCF1B	A6NI72	391 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	GABRR3	A8MPY1	467 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	NCF1C	A8MVU1	366 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	SYT5	O00445	386 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	NEURL1	O76050	574 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	SEC31A	O94979	1220 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	CSTB	P04080	98 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	NCF1	P14598	390 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	ZNF37A	P17032	561 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	TCP1	P17987	556 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	PPP2R1B	P30154	601 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	RPL21	P46778	160 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	AGTR2	P50052	363 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	ALDH18A1	P54886	795 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	ELL	P55199	621 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	ARL4C	P56559	192 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	AP2B1	P63010	937 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	BTN3A2	P78410	334 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	TXNL4A	P83876	142 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	HSF1	Q00613	529 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	REEP5	Q00765	189 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	RGS1	Q08116	209 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	BLMH	Q13867	455 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	RUNX2	Q13950	521 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	TSN	Q15631	228 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	INA	Q16352	499 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	EXT1	Q16394	746 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	C3AR1	Q16581	482 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	MEP1A	Q16819	746 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	ADNP2	Q6IQ32	1131 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	C3P1	Q6ZMU1	363 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	C16orf47	Q6ZP98	133 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	GALNTL5	Q7Z4T8	443 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	ZC3HC1	Q86WB0	502 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	RPS19BP1	Q86WX3	136 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	FBXO36	Q8NEA4	188 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	NFAM1	Q8NET5	270 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	GABPB2	Q8TAK5	448 aa	Predicted RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	ELP5	Q8TE02	316 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	CREB3L4	Q8TEY5	395 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	ATL1	Q8WXF7	558 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	ESAM	Q96AP7	390 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	PDLIM5	Q96HC4	596 aa	Known RBP	6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	OR1F2P	Q96R84	312 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	KRT12	Q99456	494 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	EGFL8	Q99944	293 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	CAB39L	Q9H9S4	337 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	GRPEL1	Q9HAV7	217 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	MMP25	Q9NPA2	562 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	SMYD2	Q9NRG4	433 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	TINAG	Q9UJW2	476 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	ENTPD4	Q9Y227	616 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	PDZD2	O15018	2839 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	DCHS2	Q6V1P9	2916 aa		6.54	□□□□□ -1.36
MARK3-223	ENST00000561071	PKDREJ	Q9NTG1	2253 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	OTOG	Q6ZRI0	2925 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	EFCAB8	A8MWE9	144 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	TAPBP	O15533	448 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	HNRNPR	O43390	633 aa	Known RBP	6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	SLC19A2	O60779	497 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	MBP	P02686	304 aa	Predicted RBP	6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	SP1	P08047	785 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	CYC1	P08574	325 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	ITGA5	P08648	1049 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	SMIM10L1	P0DMW3	83 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	IL10	P22301	178 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	TNFRSF8	P28908	595 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	EEF1D	P29692	281 aa	Known RBP	6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	SSTR1	P30872	391 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	HNRNPH1	P31943	449 aa	Known RBP	6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	AHR	P35869	848 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	SERPINF1	P36955	418 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	RFC3	P40938	356 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	CA7	P43166	264 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	GSTM5	P46439	218 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	NR0B1	P51843	470 aa	Known RBP	6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	HNRNPF	P52597	415 aa	Known RBP	6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	DGKQ	P52824	942 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	ADORA2A-AS1	P86434	159 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	KRT72	Q14CN4	511 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	GRAMD1B	Q3KR37	738 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	SLC25A25	Q6KCM7	469 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	LIN54	Q6MZP7	749 aa		6.53	□□□□□ -1.36
MARK3-223	ENST00000561071	CCDC144NL	Q6NUI1	221 aa		6.53	□□□□□ -1.36

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