RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 UCN2Q96RP3 112 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 TRIB1Q96RU8 372 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 PAIP2Q9BPZ3 127 aaKnown RBP10.8□□□□□ -0.68
CKAP4-202ENST00000552828 ACPTQ9BZG2 426 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 OR10A5Q9H207 317 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 NKIRAS1Q9NYS0 192 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 CAMK2AQ9UQM7 478 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 TRAF6Q9Y4K3 522 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 NCKAP5O14513 1909 aa10.8□□□□□ -0.68
CKAP4-202ENST00000552828 FBN3Q75N90 2809 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 A0A1W2PS29 197 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 CLCA1A8K7I4 914 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 TMEM114B3SHH9 223 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 SASH3O75995 380 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 ACTL6AO96019 429 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 HRGP04196 525 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 SERPINE1P05121 402 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 CT62P0C5K7 136 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 GRK2P25098 689 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 ABCD3P28288 659 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 MASP1P48740 699 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 MAPK12P53778 367 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 HMGCS1Q01581 520 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 ACSM2AQ08AH3 577 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 CHI3L2Q15782 390 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 SPIN4Q56A73 249 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 SPDYAQ5MJ70 313 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 HLA-DQA1Q5Y7H0 255 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 ACSM2BQ68CK6 577 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 ZNF771Q7L3S4 317 aaPredicted RBP10.79□□□□□ -0.68
CKAP4-202ENST00000552828 KRTAP1-3Q8IUG1 177 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 ARL8AQ96BM9 186 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 C18orf12Q96KH6 178 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 ATP6V1G3Q96LB4 118 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 ZFP3Q96NJ6 502 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 TNFRSF12AQ9NP84 129 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 BEX4Q9NWD9 120 aaPredicted RBP10.79□□□□□ -0.68
CKAP4-202ENST00000552828 FIS1Q9Y3D6 152 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 ARHGAP21Q5T5U3 1957 aa10.79□□□□□ -0.68
CKAP4-202ENST00000552828 SLC28A1O00337 649 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 RGS14O43566 566 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 SNUPNO95149 360 aaKnown RBP10.78□□□□□ -0.68
CKAP4-202ENST00000552828 RCBTB2O95199 551 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 HSPA4LO95757 839 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 CPMP14384 443 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 CD53P19397 219 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 GPX3P22352 226 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 PIK3R1P27986 724 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 SOX18P35713 384 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 XKP51811 444 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 AGFG1P52594 562 aaKnown RBP10.78□□□□□ -0.68
CKAP4-202ENST00000552828 TRA2BP62995 288 aaKnown RBP10.78□□□□□ -0.68
CKAP4-202ENST00000552828 BTKQ06187 659 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 LTBQ06643 244 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 MGAT2Q10469 447 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 SNTA1Q13424 505 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 WIPI1Q5MNZ9 446 aaPredicted RBP10.78□□□□□ -0.68
CKAP4-202ENST00000552828 SH2D4BQ5SQS7 431 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 KANK2Q63ZY3 851 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 SLC30A6Q6NXT4 461 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 RNF165Q6ZSG1 346 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 NUP54Q7Z3B4 507 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 C9orf106Q8NAJ2 232 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 FAM83FQ8NEG4 500 aaPredicted RBP10.78□□□□□ -0.68
CKAP4-202ENST00000552828 OR4K14Q8NGD5 310 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 OR1J4Q8NGS1 313 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 MGARPQ8TDB4 240 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 SMPDL3BQ92485 455 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 HGDQ93099 445 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 APIPQ96GX9 242 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 SFXN3Q9BWM7 321 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 NXF5Q9H1B4 397 aaKnown RBP10.78□□□□□ -0.68
CKAP4-202ENST00000552828 ACBD3Q9H3P7 528 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 NEUROD4Q9HD90 331 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 MCM8Q9UJA3 840 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 CES1P1Q9UKY3 287 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 DNAJC15Q9Y5T4 150 aa10.78□□□□□ -0.68
CKAP4-202ENST00000552828 NINQ8N4C6 2090 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 GNG14A0A1W2PPG7 69 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 A0A1W2PPR1 153 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 EEF1E1-BLOC1S5C9J1V9 151 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 SNPHO15079 494 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 EEF1E1O43324 174 aaKnown RBP10.77□□□□□ -0.69
CKAP4-202ENST00000552828 PCDH7O60245 1069 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 PPM1BO75688 479 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 RSL1D1O76021 490 aaKnown RBP10.77□□□□□ -0.69
CKAP4-202ENST00000552828 INHBBP09529 407 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 TMIGD3P0DMS9 266 aaPredicted RBP10.77□□□□□ -0.69
CKAP4-202ENST00000552828 CYP4B1P13584 511 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 PORP16435 677 aaPredicted RBP10.77□□□□□ -0.69
CKAP4-202ENST00000552828 BGNP21810 368 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 ARRB2P32121 409 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 PTGDSP41222 190 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 PCYT1AP49585 367 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 WDR4P57081 412 aaKnown RBP10.77□□□□□ -0.69
CKAP4-202ENST00000552828 ABCE1P61221 599 aaKnown RBP10.77□□□□□ -0.69
CKAP4-202ENST00000552828 DCAF7P61962 342 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 MAP4K2Q12851 820 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 FOXF2Q12947 444 aa10.77□□□□□ -0.69
CKAP4-202ENST00000552828 STX3Q13277 289 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms