RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ZZZ3Q8IYH5 903 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 CCDC63Q8NA47 563 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 SIMC1Q8NDZ2 872 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 OR7G2Q8NG99 324 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 GOT1L1Q8NHS2 421 aaPredicted RBP9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 UBLCP1Q8WVY7 318 aaPredicted RBP9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 KCNA7Q96RP8 456 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 SH3GL2Q99962 352 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 SFXN3Q9BWM7 321 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 EBPLQ9BY08 206 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 POLDIP3Q9BY77 421 aaKnown RBP9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 EPB41L4BQ9H329 900 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 PTGES2Q9H7Z7 377 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 GALNT9Q9HCQ5 603 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 Q9N2J8 555 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 SERHLQ9NQF3 203 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 DDX18Q9NVP1 670 aaKnown RBP9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 DNAJB12Q9NXW2 375 aaKnown RBP9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 EMCNQ9ULC0 261 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 MAPRE3Q9UPY8 281 aa9.9□□□□□ -0.82
VTI1BP3-201ENST00000550220 F8P00451 2351 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 OTOGQ6ZRI0 2925 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 TUBAL3A6NHL2 446 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 SEC22BO75396 215 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 RCBTB2O95199 551 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 CRHP06850 196 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 TMIGD3P0DMS9 266 aaPredicted RBP9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 NEFHP12036 1026 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 KRT4P19013 534 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 GRK2P25098 689 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 DPP4P27487 766 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 ZNF136P52737 540 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 DGKQP52824 942 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 FOXA1P55317 472 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 GFRA1P56159 465 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 DSCR4P56555 118 aaPredicted RBP9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 CORO7P57737 925 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 PSG6Q00889 435 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 ZNF155Q12901 538 aaPredicted RBP9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 GANABQ14697 944 aaKnown RBP9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 FLYWCH1Q4VC44 716 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 OR2A2Q6IF42 318 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 NOXRED1Q6NXP6 359 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 RNF165Q6ZSG1 346 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 OR2L13Q8N349 312 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 RELL2Q8NC24 303 aaPredicted RBP9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 NAXEQ8NCW5 288 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 OR4K17Q8NGC6 315 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 ZFP28Q8NHY6 868 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 RNF138Q8WVD3 245 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 ZNF764Q96H86 408 aaPredicted RBP9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 SFXN2Q96NB2 322 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 PIGMQ9H3S5 423 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 RASSF1Q9NS23 344 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 C1orf109Q9NX04 203 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 CRIM1Q9NZV1 1036 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 PPP4R1LQ9P1A2 415 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 STOML1Q9UBI4 398 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 DKKL1Q9UK85 242 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 CBLCQ9ULV8 474 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 ABCG2Q9UNQ0 655 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 TMED5Q9Y3A6 229 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 PDZD2O15018 2839 aa9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 ANKHD1Q8IWZ3 2542 aaKnown RBP9.89□□□□□ -0.83
VTI1BP3-201ENST00000550220 FAM221AA4D161 298 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 C2orf72A6NCS6 295 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 A6NNC1 897 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 UPK1AO00322 258 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 TRIM13O60858 407 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 JUNP05412 331 aaKnown RBP9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 EPXP11678 715 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 PEPDP12955 493 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 ZNF708P17019 499 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 DNAJA1P31689 397 aaKnown RBP9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 EVI2BP34910 448 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 PCYT1AP49585 367 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 DIO3P55073 304 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 RIPPLY3P57055 190 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 OCRLQ01968 901 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 SRYQ05066 204 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 SLC18A2Q05940 514 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 GLYR1Q49A26 553 aaPredicted RBP9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 VPS26BQ4G0F5 336 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 POMZP3Q6PJE2 187 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 NPSR1Q6W5P4 371 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 ADGRE4PQ86SQ3 457 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 RIBC1Q8N443 379 aaPredicted RBP9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 MEIOBQ8N635 442 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 CHDHQ8NE62 594 aaPredicted RBP9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 CEP70Q8NHQ1 597 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 CDC26Q8NHZ8 85 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 ELP4Q96EB1 424 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 ZBED6CLQ96FA7 236 aaPredicted RBP9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 RMND5BQ96G75 393 aaPredicted RBP9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 AMDHD1Q96NU7 426 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 FOXC2Q99958 501 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 TUBA1CQ9BQE3 449 aa9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 LMF2Q9BU23 707 aaKnown RBP9.88□□□□□ -0.83
VTI1BP3-201ENST00000550220 CLEC4MQ9H2X3 399 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms