RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 CPLX4Q7Z7G2 160 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TICAM1Q8IUC6 712 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SLC34A3Q8N130 599 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 EID3Q8N140 333 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 RPRMLQ8N4K4 120 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 NTNG2Q96CW9 530 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ERP27Q96DN0 273 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 JSRP1Q96MG2 331 aaPredicted RBP16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TAS2R7Q9NYW3 318 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 KLHL14Q9P2G3 628 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TNFRSF10DQ9UBN6 386 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ADAM21Q9UKJ8 722 aa16.37■□□□□ 0.21
TNFRSF1A-209ENST00000536717 DCHS2Q6V1P9 2916 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 MYO1GB0I1T2 1018 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 E9PBE3 544 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 AQP7O14520 342 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ACOX3O15254 700 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 PPM1BO75688 479 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ALDOCP09972 364 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 IDO1P14902 403 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 NAGAP17050 411 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 PRPS1L1P21108 318 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 DRD5P21918 477 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 HTR1EP28566 365 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 HPCAL1P37235 193 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 RPL3P39023 403 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 CASP3P42574 277 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 PPICP45877 212 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ARFIP2P53365 341 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 DCAF7P61962 342 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ZNF630Q2M218 657 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 R3HCC1LQ7Z5L2 792 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 OR7G2Q8NG99 324 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 GFM2Q969S9 779 aaKnown RBP16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 OMA1Q96E52 524 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ZNF597Q96LX8 424 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TMEM120AQ9BXJ8 343 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ANGPTL4Q9BY76 406 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 FAM107BQ9H098 131 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 REEP4Q9H6H4 257 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 PNPLA3Q9NST1 481 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 AIG1Q9NVV5 245 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 QPCTLQ9NXS2 382 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 MAPRE3Q9UPY8 281 aa16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 GPR55Q9Y2T6 319 aaPredicted RBP16.36■□□□□ 0.21
TNFRSF1A-209ENST00000536717 FRG2CA6NGY1 282 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TO15178 435 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 AKAP10O43572 662 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 PLOD3O60568 738 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 HCN1O60741 890 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 BCAS2O75934 225 aaPredicted RBP16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 CT45A8P0DMV1 189 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 CT45A9P0DMV2 189 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 DDX5P17844 614 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 MPIP34949 423 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 MAN2A2P49641 1150 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SF3A3Q12874 501 aaKnown RBP eCLIP16.35■□□□□ 0.213e-6■■■□□ 16.5
TNFRSF1A-209ENST00000536717 GSTA3Q16772 222 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 CT45A2Q5DJT8 189 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TMEM198Q66K66 360 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 OR5M9Q8NGP3 310 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 HGDQ93099 445 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 MTERF3Q96E29 417 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 VSTM2LQ96N03 204 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 BTBD9Q96Q07 612 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 BBS4Q96RK4 519 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 NODALQ96S42 347 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 DPY30Q9C005 99 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 LDAHQ9H6V9 325 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SPRR3Q9UBC9 169 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TRIM33Q9UPN9 1127 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 APCP25054 2843 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TRGV5A0A0B4J1U4 118 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 BCKDKO14874 412 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 UGT2B11O75310 529 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SNX4O95219 450 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 CLDN14O95500 239 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 CLDN8P56748 225 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 PLCXD2Q0VAA5 305 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 TMEM81Q6P7N7 255 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SDCCAG3Q96C92 435 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 PPCDCQ96CD2 204 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 PRPF18Q99633 342 aaKnown RBP16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SLC6A15Q9H2J7 730 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 UBQLN3Q9H347 655 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 ACKR4Q9NPB9 350 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 GPR45Q9Y5Y3 372 aa16.35■□□□□ 0.21
TNFRSF1A-209ENST00000536717 KIAA1549Q9HCM3 1950 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SCAMP2O15127 329 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 HNRNPRO43390 633 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 DRD4P21917 467 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 GDF1P27539 372 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 PTGDSP41222 190 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 NCBP2P52298 156 aaKnown RBP eCLIP16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 CORO7P57737 925 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 STX1BP61266 288 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 RPP38P78345 283 aaKnown RBP16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 NPSR1Q6W5P4 371 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 NUP54Q7Z3B4 507 aa16.34■□□□□ 0.21
TNFRSF1A-209ENST00000536717 SARAFQ96BY9 339 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms