RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 NETO1Q8TDF5 533 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 CHPT1Q8WUD6 406 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 TFAP2CQ92754 450 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 GATA6Q92908 595 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 PRR11Q96HE9 360 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-236ENST00000533667 ZNF300Q96RE9 604 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-236ENST00000533667 SORT1Q99523 831 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 BEX2Q9BXY8 128 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 LDAHQ9H6V9 325 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 BEX1Q9HBH7 125 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 B3GNT3Q9Y2A9 372 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 HIF3AQ9Y2N7 669 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 MYOCOSA0A1B0GUC4 107 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 A0A1W2PP55 124 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 TCRBV3S1A0A5B6 114 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 SMCO3A2RU48 225 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 DRGXA6NNA5 263 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 A8MU76 341 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 H3BMQ9 156 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 MAN2B1O00754 1011 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 PTGESO14684 152 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 POLR1CO15160 346 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-236ENST00000533667 UPK1BO75841 260 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 BPNT1O95861 308 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 TFPTP0C1Z6 253 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 T-ENOLP0DO92 83 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 PNMTP11086 282 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 ACVR1BP36896 505 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 SLC6A8P48029 635 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 CSNK1DP48730 415 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 HTR6P50406 440 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 NCS1P62166 190 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 APOFQ13790 326 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 GRM7Q14831 915 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 PLAG1Q6DJT9 500 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 FAM198BQ6UWH4 519 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 VTCN1Q7Z7D3 282 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 CLECL1Q8IZS7 167 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 SLC15A4Q8N697 577 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 ANKK1Q8NFD2 765 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 COG8Q96MW5 612 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 SYT3Q9BQG1 590 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 ZNF416Q9BWM5 594 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 RGCCQ9H4X1 137 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 NMNAT1Q9HAN9 279 aaPredicted RBP6.65□□□□□ -1.34
CTNND1-236ENST00000533667 POLE4Q9NR33 117 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 INPP5EQ9NRR6 644 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 SUSD2Q9UGT4 822 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 OR1A2Q9Y585 309 aa6.65□□□□□ -1.34
CTNND1-236ENST00000533667 ZNF860A6NHJ4 632 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 CCDC85CA6NKD9 419 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 TMEM189-UBE2V1I3L0A0 370 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 LYRM1O43325 122 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 SFTPBP07988 381 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 RAB3AP20336 220 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 DDCP20711 480 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 GGT2P36268 569 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 MS4A2Q01362 244 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 FLI1Q01543 452 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-236ENST00000533667 RAB40BQ12829 278 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 MALLQ13021 153 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 ATXN7L3Q14CW9 347 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-236ENST00000533667 ATAD3CQ5T2N8 411 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 METTL11BQ5VVY1 283 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 RTL10Q7L3V2 364 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 PXKQ7Z7A4 578 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 LAS2Q8IYD9 372 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 ADGRG5Q8IZF4 528 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 TMEM151AQ8N4L1 468 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 C3orf58Q8NDZ4 430 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 OR52E2Q8NGJ4 325 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 OR5M3Q8NGP4 307 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 KIAA1143Q96AT1 154 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-236ENST00000533667 APIPQ96GX9 242 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 PHB2Q99623 299 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 SLC6A7Q99884 636 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.65□□□□□ -1.355e-10■□□□□ 9.3
CTNND1-236ENST00000533667 ERVK13-1Q9NX77 482 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 INTS6Q9UL03 887 aaKnown RBP6.65□□□□□ -1.35
CTNND1-236ENST00000533667 ADAMTS5Q9UNA0 930 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 NUBP2Q9Y5Y2 271 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 LOC285095A0A1B0GVY8 99 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 C2orf78A6NCI8 922 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 BCAS1O75363 584 aaPredicted RBP6.65□□□□□ -1.35
CTNND1-236ENST00000533667 IL33O95760 270 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 WDPCPO95876 746 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 MMP2P08253 660 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 HBQ1P09105 142 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 THBS2P35442 1172 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 NUDT1P36639 197 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 CDKN2CP42773 168 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 GPR4P46093 362 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 FNTBP49356 437 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 GATMP50440 423 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 TAS2R31P59538 309 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 CST6Q15828 149 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 SGCAQ16586 387 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 NKAPLQ5M9Q1 402 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 FAM69AQ5T7M9 428 aa6.65□□□□□ -1.35
CTNND1-236ENST00000533667 NDUFAF5Q5TEU4 345 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms