RNA–Protein interactions for RNA: ENST00000514179.5

RAPGEF6-213, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 2

Gene RAPGEF6, Length 2,200 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-213ENST00000514179 TGM3Q08188 693 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 SGCGQ13326 291 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 MADCAM1Q13477 382 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 TRAM2Q15035 370 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 SF3B4Q15427 424 aaKnown RBP eCLIP12.09□□□□□ -0.471e-6■■■□□ 15.5
RAPGEF6-213ENST00000514179 PLK5Q496M5 336 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 MRM1Q6IN84 353 aaKnown RBP12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 SLC48A1Q6P1K1 146 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 RAB43Q86YS6 212 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 UBQLNLQ8IYU4 475 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 CAMKK1Q8N5S9 505 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 OR2L3Q8NG85 312 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 GANCQ8TET4 914 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 TM9SF4Q92544 642 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 KAT2AQ92830 837 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 UFD1Q92890 307 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 FGF11Q92914 225 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 ZNF486Q96H40 463 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 KXD1Q9BQD3 176 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 GRIP1Q9Y3R0 1128 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 SLC35F4A4IF30 521 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 FABP12A6NFH5 140 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 STK25O00506 426 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 AP3D1O14617 1153 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 SLC30A4O14863 429 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 F3P13726 295 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 IFNA8P32881 189 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 TRIM23P36406 574 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 RFX2P48378 723 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 SOX9P48436 509 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 SLC9A3P48764 834 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 GAS1P54826 345 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 SCN1BQ07699 218 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 ST3GAL3Q11203 375 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 TSPAN31Q12999 210 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 COL9A2Q14055 689 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 DUSP6Q16828 381 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 MINDY4Q4G0A6 757 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 PDZK1Q5T2W1 519 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 UBE2Q1Q7Z7E8 422 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 SLC7A5P1Q8MH63 180 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 CLDN22Q8N7P3 220 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 ZFP41Q8N8Y5 198 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 PIGXQ8TBF5 258 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 TM9SF2Q99805 663 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 TIMM29Q9BSF4 260 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 PRRG3Q9BZD7 231 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 SLC38A1Q9H2H9 487 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 MIXL1Q9H2W2 232 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 IGFLR1Q9H665 355 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 MARCH7Q9H992 704 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 FGF20Q9NP95 211 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 SPHK1Q9NYA1 384 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 NPAP1Q9NZP6 1156 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 PLEKHB1Q9UF11 243 aaPredicted RBP12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 APOBEC3BQ9UH17 382 aaKnown RBP12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 EXOSC1Q9Y3B2 195 aaKnown RBP12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 ZNF780BQ9Y6R6 833 aa12.09□□□□□ -0.47
RAPGEF6-213ENST00000514179 TMEM129A0AVI4 362 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 ISM1B1AKI9 464 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 SYT5O00445 386 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 TFECO14948 347 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 TMCC2O75069 709 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 FOSL1P15407 271 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 GNSP15586 552 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 TRHRP34981 398 aaPredicted RBP12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 HTR3AP46098 478 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 SEC13P55735 322 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 BTN3A2P78410 334 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 ABATP80404 500 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 GPR50Q13585 617 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 LTB4RQ15722 352 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 BCL2A1Q16548 175 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 PRAMEF8Q5VWM4 474 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 PRAMEF7Q5VXH5 474 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 SDE2Q6IQ49 451 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 PLEKHM3Q6ZWE6 761 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 LHFPL3Q86UP9 236 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 SYT14Q8NB59 555 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 ELP4Q96EB1 424 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 ARHGDIGQ99819 225 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 DDX28Q9NUL7 540 aaKnown RBP12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 KLHL28Q9NXS3 571 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 CES1P1Q9UKY3 287 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 NTNG1Q9Y2I2 539 aa12.08□□□□□ -0.48
RAPGEF6-213ENST00000514179 PROM1O43490 865 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 CEACAM5P06731 702 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 ASGR2P07307 311 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 CMPK1P30085 196 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 PEBP1P30086 187 aaKnown RBP12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 AHRP35869 848 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 CD79BP40259 229 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 CDH11P55287 796 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 RGS8P57771 180 aaPredicted RBP12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 TCEA2Q15560 299 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 PYDC2Q56P42 97 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 C9orf50Q5SZB4 431 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 ATAD3CQ5T2N8 411 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 DDI2Q5TDH0 399 aa12.07□□□□□ -0.48
RAPGEF6-213ENST00000514179 SLC30A6Q6NXT4 461 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms