RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 DUSP8Q13202 625 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 DCST2Q5T1A1 773 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 AP1ARQ63HQ0 302 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 PGBD2Q6P3X8 592 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 B3GNT6Q6ZMB0 384 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 GALNT12Q8IXK2 581 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 DEPDC4Q8N2C3 294 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 ZNF619Q8N2I2 560 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 OR13F1Q8NGS4 319 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 FAM81AQ8TBF8 368 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 UBE2FQ969M7 185 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 FKBP10Q96AY3 582 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 SPRTNQ9H040 489 aaPredicted RBP13.93□□□□□ -0.18
VCAN-211ENST00000513984 FANCEQ9HB96 536 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 PRTFDC1Q9NRG1 225 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 RASSF1Q9NS23 344 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 KLHL28Q9NXS3 571 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 REV1Q9UBZ9 1251 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 GPR55Q9Y2T6 319 aaPredicted RBP13.93□□□□□ -0.18
VCAN-211ENST00000513984 PCDHGB1Q9Y5G3 927 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 FER1L5A0AVI2 2057 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 LAMA1P25391 3075 aa13.93□□□□□ -0.18
VCAN-211ENST00000513984 COL5A1P20908 1838 aaPredicted RBP13.93□□□□□ -0.18
VCAN-211ENST00000513984 AGAP5A6NIR3 686 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 ZAR1LA6NP61 321 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 CLDN4O14493 209 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 MRPS14O60783 128 aaKnown RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 STX11O75558 287 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 SOX30O94993 753 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 GABRB1P18505 474 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 CHMP24386 653 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 CSF2RBP32927 897 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 CRISP1P54107 249 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 HSD11B2P80365 405 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 LARS2Q15031 903 aaKnown RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 PTGES3Q15185 160 aaKnown RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 PRPF38BQ5VTL8 546 aaKnown RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 GTF2IRD2BQ6EKJ0 949 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 PODNL1Q6PEZ8 512 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 GTF2IRD2Q86UP8 949 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 CLIP4Q8N3C7 705 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 COX18Q8N8Q8 333 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 OR52R1Q8NGF1 315 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 RHOXF1Q8NHV9 184 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 PMM1Q92871 262 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 MMABQ96EY8 250 aaPredicted RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 UCK2Q9BZX2 261 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 CACYBPQ9HB71 228 aaKnown RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 CCNB1IP1Q9NPC3 277 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 TMEM184BQ9Y519 407 aaPredicted RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 SNX5Q9Y5X3 404 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 ADAMTS9Q9P2N4 1935 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 SEC16AO15027 2179 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 PTGES3LE9PB15 166 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 ZNF749O43361 778 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 KIAA0513O60268 411 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 TPST2O60704 377 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 SEC14L2O76054 403 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 NKX2-2O95096 273 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 PDGFBP01127 241 aaPredicted RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 OSMP13725 252 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 PCMT1P22061 227 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 DCKP27707 260 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 SLC5A2P31639 672 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 GSSP48637 474 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 SH3BGRP55822 239 aaPredicted RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 HSD17B7P56937 341 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 PIGFQ07326 219 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 STX4Q12846 297 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 FOXD4Q12950 439 aaPredicted RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 ILKQ13418 452 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 TUBA3CQ13748 450 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 KCNAB1Q14722 419 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 SMN1Q16637 294 aaKnown RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 SYT16Q17RD7 645 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 EIPR1Q53HC9 387 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 CCNJQ5T5M9 372 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 CD300LDQ6UXZ3 194 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 ZNF836Q6ZNA1 936 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 KANSL1Q7Z3B3 1105 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 PRSS42Q7Z5A4 293 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 CLVS1Q8IUQ0 354 aaPredicted RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 D2HGDHQ8N465 521 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 MORN4Q8NDC4 146 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 ZNF420Q8TAQ5 688 aaPredicted RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 PIK3R3Q92569 461 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 DIO2Q92813 273 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 LMF2Q9BU23 707 aaKnown RBP13.92□□□□□ -0.18
VCAN-211ENST00000513984 ANKRD19PQ9H560 264 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 POLE3Q9NRF9 147 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 NLGN3Q9NZ94 848 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 ZNF232Q9UNY5 417 aa13.92□□□□□ -0.18
VCAN-211ENST00000513984 COL6A3P12111 3177 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 FRS3O43559 492 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 AHCYL1O43865 530 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 FAM20BO75063 409 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 DBIP07108 87 aaKnown RBP13.91□□□□□ -0.18
VCAN-211ENST00000513984 ITIH1P19827 911 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 CD1CP29017 333 aa13.91□□□□□ -0.18
VCAN-211ENST00000513984 EPHA8P29322 1005 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms