RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 RNF175Q8N4F7 328 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 TBC1D19Q8N5T2 526 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 OR6Q1Q8NGQ2 317 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 NDNFQ8TB73 568 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 HPS1Q92902 700 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 APOL4Q9BPW4 351 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 DUSP21Q9H596 190 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 IKZF5Q9H5V7 419 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 KAT8Q9H7Z6 458 aaKnown RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 ANKHQ9HCJ1 492 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 TMEFF2Q9UIK5 374 aaPredicted RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 UTS2RQ9UKP6 389 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 MAP4K5Q9Y4K4 846 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 HS3ST3B1Q9Y662 390 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 KALRNO60229 2985 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 A0A0G2JN53 185 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 SLC28A1O00337 649 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 ERN1O75460 977 aaKnown RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 SERPINA1P01009 418 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 BMP4P12644 408 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 EPB42P16452 691 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 ALOX12P18054 663 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 MMP11P24347 488 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 CXCR2P25025 360 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 PSMB9P28065 219 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 VBP1P61758 197 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 IFITM3Q01628 133 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 PPP1R8Q12972 351 aaKnown RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 NPTX1Q15818 432 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 DEFB134Q4QY38 66 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 SPANXN4Q5MJ08 99 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 SHQ1Q6PI26 577 aaKnown RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 KIRREL2Q6UWL6 708 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 RAB43Q86YS6 212 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 KRT78Q8N1N4 520 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 OR51Q1Q8NH59 317 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 DYNC2LI1Q8TCX1 351 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 YIPF6Q96EC8 236 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 FAM120BQ96EK7 910 aaKnown RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 ABHD17AQ96GS6 310 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 PYURFQ96I23 114 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 OR52E6Q96RD3 313 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 ZNF300Q96RE9 604 aaPredicted RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 TGIF2Q9GZN2 237 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 RHBGQ9H310 441 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 MKKSQ9NPJ1 570 aaPredicted RBP8.79□□□□□ -1
BRCA1-219ENST00000491747 P4HTMQ9NXG6 502 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 SLC25A37Q9NYZ2 338 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 ANGPTL3Q9Y5C1 460 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 DOCK10Q96BY6 2186 aa8.79□□□□□ -1
BRCA1-219ENST00000491747 LRIT2A6NDA9 550 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 MAN1A2O60476 641 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 PDGFAP04085 211 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 SERPINB1P30740 379 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 PCYT1AP49585 367 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 CCL11P51671 97 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 PPP5CP53041 499 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 LSM3P62310 102 aaKnown RBP8.78□□□□□ -1
BRCA1-219ENST00000491747 RGS1Q08116 209 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 TRAF3Q13114 568 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 DGCR6Q14129 220 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 C1QTNF12Q5T7M4 302 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 ANKRD34AQ69YU3 496 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 FAAH2Q6GMR7 532 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 RNF165Q6ZSG1 346 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 TMEM179BQ7Z7N9 219 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 NUDT8Q8WV74 236 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 TBC1D20Q96BZ9 403 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 C8orf44Q96CB5 159 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 MS4A6EQ96DS6 147 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 DACH2Q96NX9 599 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 CRB3Q9BUF7 120 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 EFCAB11Q9BUY7 163 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 PITHD1Q9GZP4 211 aaPredicted RBP8.78□□□□□ -1
BRCA1-219ENST00000491747 CLMPQ9H6B4 373 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 EXD2Q9NVH0 621 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 ERVK-18Q9QC07 812 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 ZNF229Q9UJW7 825 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 NXT1Q9UKK6 140 aaKnown RBP8.78□□□□□ -1
BRCA1-219ENST00000491747 ZNF232Q9UNY5 417 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 SAMD4AQ9UPU9 718 aaKnown RBP8.78□□□□□ -1
BRCA1-219ENST00000491747 CCL27Q9Y4X3 112 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 PCDHGA10Q9Y5H3 936 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 ISPDA4D126 451 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 ANKDD1BA6NHY2 528 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 IDSB3KWA1 339 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 RGS10O43665 173 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 ULK1O75385 1050 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 CLEC3AO75596 197 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 GSTT2P0CG29 244 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 GSTT2BP0CG30 244 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 CD40LGP29965 261 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 FMO3P31513 532 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 MAGEA2P43356 314 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 XCR1P46094 333 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 PGS1Q32NB8 556 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 GRHL2Q6ISB3 625 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 PRSS48Q7RTY5 328 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 ZDHHC21Q8IVQ6 265 aa8.78□□□□□ -1
BRCA1-219ENST00000491747 MSRB3Q8IXL7 192 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms