RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 TCP11Q8WWU5 503 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 NT5C3BQ969T7 300 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 ZNF479Q96JC4 524 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 PAPOLGQ9BWT3 736 aaKnown RBP6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 MAGT1Q9H0U3 335 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 TAAR2Q9P1P5 351 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 KLHL8Q9P2G9 620 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 ZNF346Q9UL40 294 aaKnown RBP6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 OR10H1Q9Y4A9 318 aa6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 COL5A3P25940 1745 aaPredicted RBP6.39□□□□□ -1.39
GAPVD1-217ENST00000479511 hCG_38984A0A1B0GV85 526 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 LRRC30A6NM36 301 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 SLC1A7O00341 560 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 IMPA2O14732 288 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 CIDEAO60543 219 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 JAK2O60674 1132 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 PRKAR1AP10644 381 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 MBL2P11226 248 aaPredicted RBP6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 MARK3P27448 753 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 PEX19P40855 299 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 HTR5AP47898 357 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 NDST1P52848 882 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 XGP55808 180 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 HERVK_113P63132 956 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 ERVK-8P63133 956 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 HKDC1Q2TB90 917 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 ATF7IP2Q5U623 682 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 RBMS3Q6XE24 437 aaKnown RBP6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 FOXL2NBQ6ZUU3 175 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 MARVELD2Q8N4S9 558 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 BHLHE23Q8NDY6 225 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 GATAD1Q8WUU5 269 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 DYRK2Q92630 601 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 RPL3LQ92901 407 aaKnown RBP6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 PKNOX2Q96KN3 472 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 PLEKHF1Q96S99 279 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 NKX3-1Q99801 234 aaPredicted RBP6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 ERVK-6Q9BXR3 956 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 DHX33Q9H6R0 707 aaKnown RBP6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 RNF14Q9UBS8 474 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 FZR1Q9UM11 496 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 TMED5Q9Y3A6 229 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 SCN11AQ9UI33 1791 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 FER1L6Q2WGJ9 1857 aa6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 TRIP12Q14669 1992 aaPredicted RBP6.38□□□□□ -1.39
GAPVD1-217ENST00000479511 A8MU76 341 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 MEI4A8MW99 385 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 CTAGE5O15320 804 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 NXPH2O95156 264 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 PAK4O96013 591 aaPredicted RBP6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 SERPINA3P01011 423 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 EDN1P05305 212 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 GSTT2P0CG29 244 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 GSTT2BP0CG30 244 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 C4BPBP20851 252 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 PCMT1P22061 227 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 CCNCP24863 283 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 PPT1P50897 306 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 RAG2P55895 527 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 ACTR3P61158 418 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 SRYQ05066 204 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 HYAL1Q12794 435 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 RIGQ13278 110 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 PDK3Q15120 406 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 IMMTQ16891 758 aaKnown RBP6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 TCHHL1Q5QJ38 904 aaPredicted RBP6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 SYCE2Q6PIF2 218 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 VPS36Q86VN1 386 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 TTC5Q8N0Z6 440 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 SPEM1Q8N4L4 309 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 AKR7LQ8NHP1 331 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 RAET1EQ8TD07 263 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 LIPHQ8WWY8 451 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 EMG1Q92979 244 aaKnown RBP6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 ZNF778Q96MU6 729 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 CCDC77Q9BR77 488 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 C1QTNF4Q9BXJ3 329 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 MED20Q9H944 212 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 ELOVL3Q9HB03 270 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 KCNK13Q9HB14 408 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 GPR83Q9NYM4 423 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 WIPI2Q9Y4P8 454 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 SELENOKQ9Y6D0 94 aa6.37□□□□□ -1.39
GAPVD1-217ENST00000479511 MRC1P22897 1456 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 USP42Q9H9J4 1324 aaKnown RBP6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 OR5H15A6NDH6 313 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 MFSD2BA6NFX1 497 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 H3BTX0 84 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 PRRG1O14668 218 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 ZSCAN12O43309 604 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 NADKO95544 446 aaPredicted RBP6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 NGFRP08138 427 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 PRKAR2BP31323 418 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 RFC2P35250 354 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 LINC00205P59089 165 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 MRPS6P82932 125 aaKnown RBP6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 CDKL1Q00532 357 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 HNRNPDQ14103 355 aaKnown RBP6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 SEL1L3Q68CR1 1132 aa6.36□□□□□ -1.39
GAPVD1-217ENST00000479511 NEPROQ6NW34 567 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms