RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 SERHLQ9NQF3 203 aa9.45□□□□□ -0.9
CALD1-217ENST00000475772 EHD3Q9NZN3 535 aa9.45□□□□□ -0.9
CALD1-217ENST00000475772 C6orf203Q9P0P8 240 aaPredicted RBP9.45□□□□□ -0.9
CALD1-217ENST00000475772 ANGPTL3Q9Y5C1 460 aa9.45□□□□□ -0.9
CALD1-217ENST00000475772 PCDHA9Q9Y5H5 950 aa9.45□□□□□ -0.9
CALD1-217ENST00000475772 WIF1Q9Y5W5 379 aa9.45□□□□□ -0.9
CALD1-217ENST00000475772 FBN1P35555 2871 aaKnown RBP9.45□□□□□ -0.9
CALD1-217ENST00000475772 COL6A5A8TX70 2615 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 C17orf51A8MQB3 221 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 SYCE1LA8MT33 242 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 DEFB108AA8MXU0 73 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 PLOD2O00469 737 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 PPP6CO00743 305 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 HCRTR2O43614 444 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 ZIC3O60481 467 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 ERN1O75460 977 aaKnown RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 KLHL2O95198 593 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 CLDN9O95484 217 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 RHOXF2BP0C7M4 288 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 GFAPP14136 432 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 CNTFP26441 200 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 LOXP28300 417 aaPredicted RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 FEN1P39748 380 aaKnown RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 PAFAH1B1P43034 410 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 MAGEA4P43358 317 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 GAS1P54826 345 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 CLDN15P56746 228 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 CLDN18P56856 261 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 GNG11P61952 73 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 RPP38P78345 283 aaKnown RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 HMGCS1Q01581 520 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 GALNT1Q10472 559 aaPredicted RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 SNTA1Q13424 505 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 RCAN2Q14206 197 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 UBAP2Q5T6F2 1119 aaKnown RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 MROH9Q5TGP6 573 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 SLC48A1Q6P1K1 146 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 ZNF474Q6S9Z5 364 aaPredicted RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 RPS27LQ71UM5 84 aaKnown RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 GCNT2Q8N0V5 402 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 ADCY4Q8NFM4 1077 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 FBXO25Q8TCJ0 367 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 TRPC4APQ8TEL6 797 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 RNF138Q8WVD3 245 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 REPS1Q96D71 796 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 STARD4Q96DR4 205 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 CNRIP1Q96F85 164 aaPredicted RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 LCORQ96JN0 433 aaPredicted RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 COX4I2Q96KJ9 171 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 MARK4Q96L34 752 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 ZNF681Q96N22 645 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 ZFP3Q96NJ6 502 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 SERPINI1Q99574 410 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 NAPGQ99747 312 aaPredicted RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 NTMT1Q9BV86 223 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 OSBPL11Q9BXB4 747 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 METTL7AQ9H8H3 244 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 ANKRA2Q9H9E1 313 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 FARSBQ9NSD9 589 aaKnown RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 ZNF225Q9UK10 706 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 FBXL2Q9UKC9 423 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 ADAM29Q9UKF5 820 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 MAPRE3Q9UPY8 281 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 PLLPQ9Y342 182 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 TESMINQ9Y4I5 508 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 FREM1Q5H8C1 2179 aa9.44□□□□□ -0.9
CALD1-217ENST00000475772 SONP18583 2426 aaKnown RBP9.44□□□□□ -0.9
CALD1-217ENST00000475772 CUBNO60494 3623 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 A0A087X1B8 175 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 A0A096LPK6 155 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.43□□□□□ -0.9
CALD1-217ENST00000475772 A0A1W2PNV4 684 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 TO15178 435 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 GSC2O15499 205 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 CTIFO43310 598 aaKnown RBP9.43□□□□□ -0.9
CALD1-217ENST00000475772 TSPAN2O60636 221 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 CDH16O75309 829 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 IGLV1-40P01703 118 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 ALDOAP04075 364 aaKnown RBP9.43□□□□□ -0.9
CALD1-217ENST00000475772 ATP1B1P05026 303 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 ZNF708P17019 499 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 DRD5P21918 477 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 PPICP45877 212 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 PLTPP55058 493 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 B3GALT5-AS1P59052 145 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 PHEXP78562 749 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 ID3Q02535 119 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 TRAF3Q13114 568 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 LTB4RQ15722 352 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 TECRLQ5HYJ1 363 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 CCNYL2Q5T2Q4 361 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 FRG2Q64ET8 278 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 VWA1Q6PCB0 445 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 LRRC75A-AS1Q8N1F1 130 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 SPATA4Q8NEY3 305 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 OR52R1Q8NGF1 315 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 OR14L1PQ8NHC6 308 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 PPP1R14CQ8TAE6 165 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 PHF21BQ96EK2 531 aa9.43□□□□□ -0.9
CALD1-217ENST00000475772 FANCD2OSQ96PS1 177 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms