RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 DSN1Q9H410 356 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 TUBB1Q9H4B7 451 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 GLIPR2Q9H4G4 154 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 SLC35C2Q9NQQ7 365 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 TAS2R10Q9NYW0 307 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 KLRF1Q9NZS2 232 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 B4GALT7Q9UBV7 327 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 BAIAP2L1Q9UHR4 511 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 ST6GALNAC2Q9UJ37 374 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 TMCO1Q9UM00 188 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 ZNF337Q9Y3M9 751 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 ZNF780BQ9Y6R6 833 aa7.32□□□□□ -1.24
USP48-207ENST00000471752 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 FRG2CA6NGY1 282 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 CD8B2A6NJW9 211 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 SMIM23A6NLE4 172 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 EEF1E1-BLOC1S5C9J1V9 151 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 UPK1AO00322 258 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 PLOD2O00469 737 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 EEF1E1O43324 174 aaKnown RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 SCO2O43819 266 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 PLOD3O60568 738 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 PLIN3O60664 434 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 ERN1O75460 977 aaKnown RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 CBR3O75828 277 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 TNFSF13O75888 250 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 IL2RAP01589 272 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 KRT6AP02538 564 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 KRT6BP04259 564 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 CPN1P15169 458 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 CREB1P16220 341 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 KRT15P19012 456 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 CTSSP25774 331 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 HMOX2P30519 316 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 KRT6CP48668 564 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 ASCL1P50553 236 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 CLDN20P56880 219 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 TRA2BP62995 288 aaKnown RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 ACSM2AQ08AH3 577 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 FAM27E3Q08E93 113 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 CSTF3Q12996 717 aaKnown RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 LCP2Q13094 533 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 STX5Q13190 355 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 KIAA0040Q15053 153 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 GLE1Q53GS7 698 aaKnown RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 SPDYAQ5MJ70 313 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 TBCELQ5QJ74 424 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 SH2D4BQ5SQS7 431 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 ACSM2BQ68CK6 577 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 GALNT18Q6P9A2 607 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 VWA1Q6PCB0 445 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 Q6ZSR9 355 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 Q71RC1 249 aaPredicted RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 TRMT10CQ7L0Y3 403 aaKnown RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 KRTAP1-3Q8IUG1 177 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 LACC1Q8IV20 430 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 C4orf33Q8N1A6 199 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 WFDC11Q8NEX6 87 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 CLHC1Q8NHS4 586 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 FBXO30Q8TB52 745 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 ZPLD1Q8TCW7 415 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 ZNF675Q8TD23 568 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 EPS8L3Q8TE67 593 aaKnown RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 DUSP19Q8WTR2 217 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 PIK3R3Q92569 461 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 CIDECQ96AQ7 238 aaPredicted RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 STARD4Q96DR4 205 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 MTBPQ96DY7 904 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 ARSGQ96EG1 525 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 SLC35A4Q96G79 324 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 C16orf58Q96GQ5 468 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 ZNF845Q96IR2 970 aaPredicted RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 PLEKHF2Q9H8W4 249 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 CALHM2Q9HA72 323 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 CLCF1Q9UBD9 225 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 ZNF629Q9UEG4 869 aaPredicted RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 FETUBQ9UGM5 382 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 PCDHGB3Q9Y5G1 929 aa7.31□□□□□ -1.24
USP48-207ENST00000471752 FN1P02751 2386 aaKnown RBP7.31□□□□□ -1.24
USP48-207ENST00000471752 FBN1P35555 2871 aaKnown RBP7.3□□□□□ -1.24
USP48-207ENST00000471752 DOCK7Q96N67 2140 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 GOLGA6L10A6NI86 522 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 OR6C70A6NIJ9 312 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 CAPN14A8MX76 684 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 DVL2O14641 736 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 ACOX3O15254 700 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 OIP5O43482 229 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 AKAP10O43572 662 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 RCBTB2O95199 551 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 ATE1O95260 518 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 PSMG1O95456 288 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 NTN1O95631 604 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 TMIGD3P0DMS9 266 aaPredicted RBP7.3□□□□□ -1.24
USP48-207ENST00000471752 EPXP11678 715 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 DRD2P14416 443 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 TAC1P20366 129 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 DDCP20711 480 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 IL11P20809 199 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 GRK2P25098 689 aa7.3□□□□□ -1.24
USP48-207ENST00000471752 DPP4P27487 766 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms