RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 ELAVL4P26378 380 aaKnown RBP4.43□□□□□ -1.7
CCDC39-202ENST00000471307 PDHA2P29803 388 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 CASQ1P31415 396 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 PCGF2P35227 344 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 SOX3P41225 446 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 RGS7P49802 495 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 TKTL1P51854 596 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 PPP5CP53041 499 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 LIMK2P53671 638 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 GNG11P61952 73 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 SRSF9Q13242 221 aaKnown RBP eCLIP4.43□□□□□ -1.7
CCDC39-202ENST00000471307 PLD1Q13393 1074 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 GPM6BQ13491 265 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 CAMK2DQ13557 499 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 PIGHQ14442 188 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-202ENST00000471307 MORF4L2Q15014 288 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 FAM182AQ5T1J6 154 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 OR6B2Q6IFH4 312 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 DNAJC24Q6P3W2 148 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 IYDQ6PHW0 289 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 SIX6OS1Q8N1H7 587 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 ARHGAP18Q8N392 663 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 ATAD1Q8NBU5 361 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 ZNF564Q8TBZ8 553 aaPredicted RBP4.43□□□□□ -1.7
CCDC39-202ENST00000471307 NPRL2Q8WTW4 380 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 CCDC114Q96M63 670 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 CFAP57Q96MR6 1250 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 KLHL5Q96PQ7 755 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 ABHD1Q96SE0 405 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 FERMT1Q9BQL6 677 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 CNPY3Q9BT09 278 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 KRTAP4-4Q9BYR3 166 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 PARLQ9H300 379 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 PRO3102Q9H379 93 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 TRIM10Q9UDY6 481 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 LNPEPQ9UIQ6 1025 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 ANAPC7Q9UJX3 599 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 PRDM4Q9UKN5 801 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 SCML2Q9UQR0 700 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 ASB3Q9Y575 518 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 ALG6Q9Y672 507 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 GBF1Q92538 1859 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 PLXNA4Q9HCM2 1894 aa4.43□□□□□ -1.7
CCDC39-202ENST00000471307 TRANK1O15050 2925 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 ZNF638Q14966 1978 aaKnown RBP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 A8MU10 97 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 A8MXK9 166 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 MIF4GDA9UHW6 222 aaKnown RBP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 GOLGA8SH3BPF8 625 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 TRIM77I1YAP6 450 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 PRRG1O14668 218 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 SLC7A4O43246 635 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 HSF2BPO75031 334 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 PROSCO94903 275 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 PDGFRAP16234 1089 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 DNAJB1P25685 340 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 CA8P35219 290 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 CAPGP40121 348 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 MATKP42679 507 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 DAOAP59103 153 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 ADIGQ0VDE8 80 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 SNTB1Q13884 538 aaKnown RBP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 IL11RAQ14626 422 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 MESDQ14696 234 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 SLMAPQ14BN4 828 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 RPS6KA1Q15418 735 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 LRIT3Q3SXY7 679 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 GPR33Q49SQ1 333 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 KRBOX4Q5JUW0 171 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 LRRC38Q5VT99 294 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 CNSTQ6PJW8 725 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 SYT10Q6XYQ8 523 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 MSANTD1Q6ZTZ1 278 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 FAM183BPQ6ZVS7 135 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 DET1Q7L5Y6 550 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 PEX26Q7Z412 305 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 CAMKMTQ7Z624 323 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 ADCK2Q7Z695 626 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 PHLDB2Q86SQ0 1253 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 ITIH5Q86UX2 942 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 LCA5Q86VQ0 697 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 MARCH9Q86YJ5 346 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 PHC2Q8IXK0 858 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 SLC35F6Q8N357 371 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 TEX9Q8N6V9 391 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 RASGEF1AQ8N9B8 481 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 C11orf45Q8TAV5 145 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 RXFP2Q8WXD0 754 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 NT5C3BQ969T7 300 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 C16orf45Q96MC5 204 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 MCEEQ96PE7 176 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 PSMB7Q99436 277 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 FEVQ99581 238 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 NAPGQ99747 312 aaPredicted RBP4.42□□□□□ -1.7
CCDC39-202ENST00000471307 CCDC3Q9BQI4 270 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 ULBP1Q9BZM6 244 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 TUBB1Q9H4B7 451 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 GNB4Q9HAV0 340 aa4.42□□□□□ -1.7
CCDC39-202ENST00000471307 POPDC2Q9HBU9 364 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms