RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 AGAP20933 346 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 ELAVL4P26378 380 aaKnown RBP12.93□□□□□ -0.34
TOP3B-215ENST00000470338 GPC1P35052 558 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 KRT20P35900 424 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 MAN2A2P49641 1150 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 CDK9P50750 372 aaKnown RBP12.93□□□□□ -0.34
TOP3B-215ENST00000470338 GAB1Q13480 694 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 GXYLT1Q4G148 440 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 CPTPQ5TA50 214 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 XKRXQ6PP77 449 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 C3P1Q6ZMU1 363 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 LARP4Q71RC2 724 aaKnown RBP eCLIP12.93□□□□□ -0.34
TOP3B-215ENST00000470338 MRGPRGQ86SM5 289 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 KRTCAP2Q8N6L1 136 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 CEP70Q8NHQ1 597 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 NEIL3Q8TAT5 605 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 RAB3IL1Q8TBN0 382 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 MGARPQ8TDB4 240 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 NUDT8Q8WV74 236 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 ARL8AQ96BM9 186 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 PPP1R36Q96LQ0 422 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 OSBPL11Q9BXB4 747 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 TP63Q9H3D4 680 aaPredicted RBP12.93□□□□□ -0.34
TOP3B-215ENST00000470338 LDAHQ9H6V9 325 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 MEAF6Q9HAF1 191 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 NKIRAS1Q9NYS0 192 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 C15orf41Q9Y2V0 281 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 OR10H1Q9Y4A9 318 aa12.93□□□□□ -0.34
TOP3B-215ENST00000470338 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 A0A1W2PRB8 838 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 PRAMEF25A6NGN4 478 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 CYSRT1A8MQ03 144 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 SNPHO15079 494 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 EMC8O43402 210 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 ENDOUP21128 410 aaKnown RBP12.92□□□□□ -0.34
TOP3B-215ENST00000470338 GDF1P27539 372 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 PTPN6P29350 595 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 IL12BP29460 328 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 MASP1P48740 699 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 CLDN8P56748 225 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 MRPS22P82650 360 aaKnown RBP12.92□□□□□ -0.34
TOP3B-215ENST00000470338 ART3Q13508 389 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 ZNHIT3Q15649 155 aaPredicted RBP12.92□□□□□ -0.34
TOP3B-215ENST00000470338 ANGPTL8Q6UXH0 198 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 WDR53Q7Z5U6 358 aaPredicted RBP12.92□□□□□ -0.34
TOP3B-215ENST00000470338 CAMKMTQ7Z624 323 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 WDSUB1Q8N9V3 476 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 NUP43Q8NFH3 380 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 OR1J4Q8NGS1 313 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 PSMA8Q8TAA3 256 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 SARAFQ96BY9 339 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 EFHD2Q96C19 240 aaPredicted RBP12.92□□□□□ -0.34
TOP3B-215ENST00000470338 GIMAP5Q96F15 307 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 PRPF18Q99633 342 aaKnown RBP12.92□□□□□ -0.34
TOP3B-215ENST00000470338 NUF2Q9BZD4 464 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 C3orf14Q9HBI5 128 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 GALNT9Q9HCQ5 603 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 Q9N2J8 555 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 PNPLA3Q9NST1 481 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 SIRT3Q9NTG7 399 aaPredicted RBP12.92□□□□□ -0.34
TOP3B-215ENST00000470338 ATAD3AQ9NVI7 634 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 KLRF1Q9NZS2 232 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 SPRR3Q9UBC9 169 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 CBLCQ9ULV8 474 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 MAPRE3Q9UPY8 281 aa12.92□□□□□ -0.34
TOP3B-215ENST00000470338 MED12Q93074 2177 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 C2orf72A6NCS6 295 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 GNB5O14775 395 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 NKX2-2O95096 273 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 IL33O95760 270 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 CYP4B1P13584 511 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 EFNA1P20827 205 aaPredicted RBP12.91□□□□□ -0.34
TOP3B-215ENST00000470338 SMSP52788 366 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 GAS1P54826 345 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 DIO3P55073 304 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 OCRLQ01968 901 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 DECR1Q16698 335 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 EXOSC6Q5RKV6 272 aaKnown RBP12.91□□□□□ -0.34
TOP3B-215ENST00000470338 ATG16L1Q676U5 607 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 HIST2H2BCQ6DN03 193 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 TMEM211Q6ICI0 200 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 ZCCHC12Q6PEW1 402 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 NCCRP1Q6ZVX7 275 aaPredicted RBP12.91□□□□□ -0.34
TOP3B-215ENST00000470338 TRIM42Q8IWZ5 723 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 MARVELD2Q8N4S9 558 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 CDRT4Q8N9R6 151 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 OR5P2Q8WZ92 322 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 MS4A4EQ96PG1 132 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 BHLHE41Q9C0J9 482 aaPredicted RBP12.91□□□□□ -0.34
TOP3B-215ENST00000470338 SLC6A15Q9H2J7 730 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 EXO5Q9H790 373 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 MANSC1Q9H8J5 431 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 TNFRSF10DQ9UBN6 386 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 ACAD8Q9UKU7 415 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 PCDHGB3Q9Y5G1 929 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 KLF2Q9Y5W3 355 aaPredicted RBP12.91□□□□□ -0.34
TOP3B-215ENST00000470338 UNC79Q9P2D8 2635 aa12.91□□□□□ -0.34
TOP3B-215ENST00000470338 CACNA1DQ01668 2161 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 KLF11O14901 512 aa12.9□□□□□ -0.34
TOP3B-215ENST00000470338 FADS1O60427 444 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms