RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 FAIM2Q9BWQ8 316 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 SLC26A1Q9H2B4 701 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 GLIPR2Q9H4G4 154 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 ANKRA2Q9H9E1 313 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 CLK4Q9HAZ1 481 aaKnown RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 MKKSQ9NPJ1 570 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 SLC35C2Q9NQQ7 365 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 PRTFDC1Q9NRG1 225 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 TMEM45AQ9NWC5 275 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 GALNT8Q9NY28 637 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 IFT80Q9P2H3 777 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 ZNF282Q9UDV7 671 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-208ENST00000470268 SLC7A8Q9UHI5 535 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 PADI1Q9ULC6 663 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 PCDHGA7Q9Y5G6 932 aa4.41□□□□□ -1.7
SF3B1-208ENST00000470268 LAMA5O15230 3695 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 FER1L5A0AVI2 2057 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 LOC101059948A0A1B0GTJ6 334 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 PRSS51A0A1B0GVH4 220 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 EIF4E1BA6NMX2 242 aaKnown RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 MYO1GB0I1T2 1018 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 IDSB3KWA1 339 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 RNASET2O00584 256 aaKnown RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 CFLARO15519 480 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 GUCY1B2O75343 617 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 NME6O75414 186 aaPredicted RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 ATP5HO75947 161 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 C6orf47O95873 294 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 KLK3P07288 261 aaPredicted RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 CT62P0C5K7 136 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 TCN2P20062 427 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 AGXTP21549 392 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 ENPP1P22413 925 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 THBS2P35442 1172 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 HPCAL1P37235 193 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 NUDT2P50583 147 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 CDK9P50750 372 aaKnown RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 XKP51811 444 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 HSD17B7P56937 341 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 IRX1P78414 480 aaPredicted RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 MRPS35P82673 323 aaKnown RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 HSPB3Q12988 150 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 SLC13A2Q13183 592 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 SRSF6Q13247 344 aaKnown RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 GAB1Q13480 694 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 NCF4Q15080 339 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 FAAH2Q6GMR7 532 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 PGM2L1Q6PCE3 622 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 DLEU7Q6UYE1 221 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 QSOX2Q6ZRP7 698 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 R3HCC1LQ7Z5L2 792 aaKnown RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 ZNF595Q8IYB9 648 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 DEFB107AQ8IZN7 70 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 FAM9CQ8IZT9 166 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 C10orf111Q8N326 155 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 FAM26EQ8N5C1 309 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 ENDOVQ8N8Q3 282 aaKnown RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 DTX3Q8N9I9 347 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 OR4K14Q8NGD5 310 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 OR9A2Q8NGT5 310 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 TSPEARQ8WU66 669 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 CT55Q8WUE5 264 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 NRG4Q8WWG1 115 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 TANKQ92844 425 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 FKBP10Q96AY3 582 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 ZBTB18Q99592 522 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 SLC25A23Q9BV35 468 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 ALOXE3Q9BYJ1 711 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 B3GNT4Q9C0J1 378 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 PAIP1Q9H074 479 aaKnown RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 POFUT1Q9H488 388 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 IKZF5Q9H5V7 419 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 CXorf36Q9H7Y0 433 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 CNTD2Q9H8S5 307 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 WDR41Q9HAD4 459 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 DLL4Q9NR61 685 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 SIRT3Q9NTG7 399 aaPredicted RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 SLC25A37Q9NYZ2 338 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 VAPAQ9P0L0 249 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 MAN2B2Q9Y2E5 1009 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 NDUFAF1Q9Y375 327 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 SPACA6W5XKT8 324 aa4.4□□□□□ -1.7
SF3B1-208ENST00000470268 CNOT1A5YKK6 2376 aaKnown RBP4.4□□□□□ -1.7
SF3B1-208ENST00000470268 PTPRBP23467 1997 aa4.4□□□□□ -1.71
SF3B1-208ENST00000470268 TRBV5-3A0A0A0MS03 114 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 IGHV3-20A0A0C4DH32 117 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 A0A1W2PRB8 838 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 STMND1H3BQB6 276 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MASP2O00187 686 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 CLDN4O14493 209 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 MRASO14807 208 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ANGPT2O15123 496 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 RAD1O60671 282 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 SEMA7AO75326 666 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ATP1B1P05026 303 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 ABCB1P08183 1280 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 CPMP14384 443 aa4.39□□□□□ -1.71
SF3B1-208ENST00000470268 PORP16435 677 aaPredicted RBP4.39□□□□□ -1.71
SF3B1-208ENST00000470268 CSNK2A2P19784 350 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms