RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 OR8D4Q8NGM9 314 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 BBS10Q8TAM1 723 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 RBPMSQ93062 196 aaKnown RBP18.55■□□□□ 0.56
SDF4-205ENST00000465727 CAMK1GQ96NX5 476 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 RBP7Q96R05 134 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 ACTR6Q9GZN1 396 aa18.55■□□□□ 0.56
SDF4-205ENST00000465727 LSM7Q9UK45 103 aaKnown RBP18.55■□□□□ 0.56
SDF4-205ENST00000465727 GPR171O14626 319 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 RNF13O43567 381 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 MPC2O95563 127 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 EIF4EP06730 217 aaKnown RBP18.54■□□□□ 0.56
SDF4-205ENST00000465727 GALTP07902 379 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 ATF4P18848 351 aaPredicted RBP18.54■□□□□ 0.56
SDF4-205ENST00000465727 C4BPBP20851 252 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 HTR1FP30939 366 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 VIPR1P32241 457 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 PUDPQ08623 228 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 INSL4Q14641 139 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 SYPL1Q16563 259 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 HENMT1Q5T8I9 393 aaKnown RBP18.54■□□□□ 0.56
SDF4-205ENST00000465727 COMTD1Q86VU5 262 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 TPRA1Q86W33 373 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 NR2C2APQ86WQ0 139 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 LILRA3Q8N6C8 439 aaPredicted RBP18.54■□□□□ 0.56
SDF4-205ENST00000465727 SAMD12Q8N8I0 201 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 RASGEF1AQ8N9B8 481 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 LSM14AQ8ND56 463 aaKnown RBP18.54■□□□□ 0.56
SDF4-205ENST00000465727 OR4F15Q8NGB8 312 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 B3GNT4Q9C0J1 378 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 SERHL2Q9H4I8 314 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 PCDH10Q9P2E7 1040 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 KIF25Q9UIL4 384 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 ZFR2Q9UPR6 939 aaKnown RBP18.54■□□□□ 0.56
SDF4-205ENST00000465727 ITM2BQ9Y287 266 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 SEPT4O43236 478 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 B4GALT2O60909 372 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 ACP5P13686 325 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 F8A1P23610 371 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 CCT3P49368 545 aaKnown RBP18.54■□□□□ 0.56
SDF4-205ENST00000465727 GBX2P52951 348 aaPredicted RBP18.54■□□□□ 0.56
SDF4-205ENST00000465727 CTSCP53634 463 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 HSPB3Q12988 150 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 ZNF791Q3KP31 576 aaPredicted RBP18.54■□□□□ 0.56
SDF4-205ENST00000465727 SLC36A2Q495M3 483 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 SMARCD3Q6STE5 483 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 HSD11B1LQ7Z5J1 315 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 GPR135Q8IZ08 494 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 TOMM5Q8N4H5 51 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 OR6T1Q8NGN1 323 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 HSD17B8Q92506 261 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 OSTF1Q92882 214 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 SLC22A12Q96S37 553 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 BCL2L10Q9HD36 194 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 DLL4Q9NR61 685 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 CLEC4EQ9ULY5 219 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 NPTNQ9Y639 398 aa18.54■□□□□ 0.56
SDF4-205ENST00000465727 A0A087WUU8 490 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 TMEM88BA6NKF7 163 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 KHNYNO15037 678 aaKnown RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 SURF4O15260 269 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 SOX30O94993 753 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 HOXD4P09016 255 aaPredicted RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 NR2F1P10589 423 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 RPL17P18621 184 aaKnown RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 CD53P19397 219 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 THBS2P35442 1172 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 TSTA3Q13630 321 aaPredicted RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 LRRC73Q5JTD7 316 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 FAM180BQ6P0A1 224 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 TMEM173Q86WV6 379 aaPredicted RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 KLBQ86Z14 1044 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 ERMAPQ96PL5 475 aaPredicted RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 ACSS1Q9NUB1 689 aaPredicted RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 YIPF1Q9Y548 306 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 SLC9A3R1O14745 358 aaPredicted RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 SNAPC5O75971 98 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 OLFM2O95897 454 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 CTSAP10619 480 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 PDHA2P29803 388 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 CTSOP43234 321 aaPredicted RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 LSM11P83369 360 aaKnown RBP eCLIP18.53■□□□□ 0.566e-7■■■■■ 27.8
SDF4-205ENST00000465727 MEF2AQ02078 507 aaPredicted RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 MLC1Q15049 377 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 GSG1Q2KHT4 349 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 Q6ZVL8 140 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 KRT78Q8N1N4 520 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 SRFBP1Q8NEF9 429 aaKnown RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 OR6C4Q8NGE1 309 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 OR9A1PQ8NGU1 263 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 MRPS31Q92665 395 aaKnown RBP18.53■□□□□ 0.56
SDF4-205ENST00000465727 TM4SF18Q96CE8 201 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 SLC35G5Q96KT7 338 aa18.53■□□□□ 0.56
SDF4-205ENST00000465727 PLXND1Q9Y4D7 1925 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 URODP06132 367 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 ZP3P21754 424 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 GNA13Q14344 377 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 TAF1CQ15572 869 aaPredicted RBP18.52■□□□□ 0.56
SDF4-205ENST00000465727 TRAM1Q15629 374 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 GARNL3Q5VVW2 1013 aa18.52■□□□□ 0.56
SDF4-205ENST00000465727 CST9Q5W186 159 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms