RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 NPAP1Q9NZP6 1156 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 GSTK1Q9Y2Q3 226 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 HEBP2Q9Y5Z4 205 aa17.18■□□□□ 0.34
SYNE4-204ENST00000465425 A0A1W2PQL4 384 aaPredicted RBP17.17■□□□□ 0.34
SYNE4-204ENST00000465425 A0A1W2PQU0 124 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 MSL3P1P0C860 447 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 IL7P13232 177 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 MAT2AP31153 395 aaKnown RBP17.17■□□□□ 0.34
SYNE4-204ENST00000465425 SDC2P34741 201 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 HOXD12P35452 270 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 NKX2-5P52952 324 aaPredicted RBP17.17■□□□□ 0.34
SYNE4-204ENST00000465425 CDH11P55287 796 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 RPS25P62851 125 aaKnown RBP17.17■□□□□ 0.34
SYNE4-204ENST00000465425 SCN1BQ07699 218 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 LTB4RQ15722 352 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 DDI2Q5TDH0 399 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 ZNF776Q68DI1 518 aaPredicted RBP17.17■□□□□ 0.34
SYNE4-204ENST00000465425 ZNF517Q6ZMY9 492 aaPredicted RBP17.17■□□□□ 0.34
SYNE4-204ENST00000465425 SHFQ7M4L6 423 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 MRGPREQ86SM8 312 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 OR52P1PQ8NH57 321 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 TM9SF4Q92544 642 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 COL26A1Q96A83 441 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 DIRAS2Q96HU8 199 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 C1QTNF7Q9BXJ2 289 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 C1QTNF2Q9BXJ5 285 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 YARS2Q9Y2Z4 477 aaKnown RBP17.17■□□□□ 0.34
SYNE4-204ENST00000465425 GRIP1Q9Y3R0 1128 aa17.17■□□□□ 0.34
SYNE4-204ENST00000465425 GSAPA4D1B5 854 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 DUXAA6NLW8 204 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 CH25HO95992 272 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 CLEC2LP0C7M8 214 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 PRKAR1BP31321 381 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 GAS1P54826 345 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 DAB2P98082 770 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 HOXC5Q00444 222 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 FLYWCH1Q4VC44 716 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 C2orf27AQ580R0 203 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 PDZK1Q5T2W1 519 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 AP3S1Q92572 193 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 OSTF1Q92882 214 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 ZNF681Q96N22 645 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 HOXD1Q9GZZ0 328 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 ISYNA1Q9NPH2 558 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 LINC00854A0A1B0GVQ3 168 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 FABP12A6NFH5 140 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 GNSP15586 552 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 GABRA5P31644 462 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 TRHRP34981 398 aaPredicted RBP17.16■□□□□ 0.34
SYNE4-204ENST00000465425 IGFALSP35858 605 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 OMPP47874 163 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 TPBGQ13641 420 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 CEBPEQ15744 281 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 SLC30A6Q6NXT4 461 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 TMEM53Q6P2H8 277 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 HSDL2Q6YN16 418 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 OR4E2Q8NGC2 313 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 LCN9Q8WX39 176 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 ACOT11Q8WXI4 607 aaPredicted RBP17.16■□□□□ 0.34
SYNE4-204ENST00000465425 TM9SF2Q99805 663 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 APOOQ9BUR5 198 aa17.16■□□□□ 0.34
SYNE4-204ENST00000465425 KDM4EB2RXH2 506 aaPredicted RBP17.15■□□□□ 0.34
SYNE4-204ENST00000465425 FCMRO60667 390 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 TMCC2O75069 709 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 HTR3AP46098 478 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 SOX9P48436 509 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 SEC13P55735 322 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 RGS1Q08116 209 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 TAB1Q15750 504 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 ZNF425Q6IV72 752 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 LHFPL3Q86UP9 236 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 AMIGO1Q86WK6 493 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 RAB43Q86YS6 212 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 CAMKK1Q8N5S9 505 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 KCT2Q8NC54 265 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 MSLNLQ96KJ4 702 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 CTRCQ99895 268 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 MED18Q9BUE0 208 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 SYNPO2LQ9H987 977 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 PLEKHB1Q9UF11 243 aaPredicted RBP17.15■□□□□ 0.34
SYNE4-204ENST00000465425 ZNF221Q9UK13 617 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 A0A1W2PQ09 198 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 PRR19A6NJB7 356 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 NTN1O95631 604 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 GSTT2P0CG29 244 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 GSTT2BP0CG30 244 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 PDX1P52945 283 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 ENPP2Q13822 863 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 TCEA2Q15560 299 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 TMEM44Q2T9K0 475 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 FAM214AQ32MH5 1076 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 C6orf132Q5T0Z8 1188 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 XKRXQ6PP77 449 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 NKAIN4Q8IVV8 208 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 UBQLNLQ8IYU4 475 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 PSD4Q8NDX1 1056 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 GAL3ST3Q96A11 431 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 FCRL4Q96PJ5 515 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 NEDD4LQ96PU5 975 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 MCHR1Q99705 422 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms