RNA–Protein interactions for RNA: ENST00000461228.1

DNMT3A-207, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-207ENST00000461228 VWA1Q6PCB0 445 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 ZNF474Q6S9Z5 364 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 P4HA3Q7Z4N8 544 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 FBF1Q8TES7 1133 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 TMBIM1Q969X1 311 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 PIK3IP1Q96FE7 263 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 ZNF845Q96IR2 970 aaPredicted RBP13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 TMEM204Q9BSN7 226 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 FANCFQ9NPI8 374 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 KLHL28Q9NXS3 571 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 BCAP29Q9UHQ4 241 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 MCM8Q9UJA3 840 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 NFU1Q9UMS0 254 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 SNX6Q9UNH7 406 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 CR1P17927 2039 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 ABCA1O95477 2261 aa13.13□□□□□ -0.31
DNMT3A-207ENST00000461228 IGLV3-32A0A0A0MS00 114 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 ZIC3O60481 467 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 CNOT4O95628 575 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 RBP1P09455 135 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 PCSK2P16519 638 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 ZNF17P17021 662 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 IL12BP29460 328 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 EVI2BP34910 448 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 SRYQ05066 204 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 FAM27E3Q08E93 113 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 CSTF3Q12996 717 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 ERCC6LQ2NKX8 1250 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 FAM111BQ6SJ93 734 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 FAM214BQ7L5A3 538 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 CHMP1BQ7LBR1 199 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 PTGR2Q8N8N7 351 aaPredicted RBP13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 OR6K3Q8NGY3 331 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 GFM2Q969S9 779 aaKnown RBP13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 TM4SF18Q96CE8 201 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 PERPQ96FX8 193 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 PGM2Q96G03 612 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 FUT8Q9BYC5 575 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 RAB17Q9H0T7 212 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 UBTD1Q9HAC8 227 aa13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 PAQR5Q9NXK6 330 aaPredicted RBP13.12□□□□□ -0.31
DNMT3A-207ENST00000461228 A0A087WV62 115 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 B4DXG7 233 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 INAFM1C9JVW0 142 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 COQ9O75208 318 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 CRLF1O75462 422 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 ERAL1O75616 437 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 SMNDC1O75940 238 aaKnown RBP eCLIP13.11□□□□□ -0.311e-6■■■□□ 16.2
DNMT3A-207ENST00000461228 PSMG1O95456 288 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 COL6A2P12110 1019 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 IL11P20809 199 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 FEN1P39748 380 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 MAGEA4P43358 317 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 TRMT12Q53H54 448 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 TTC19Q6DKK2 380 aaPredicted RBP13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 GALNT18Q6P9A2 607 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 PLEKHM3Q6ZWE6 761 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 BTLAQ7Z6A9 289 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 ZNF611Q8N823 705 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 CNEP1R1Q8N9A8 125 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 ADCY4Q8NFM4 1077 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 OR4K17Q8NGC6 315 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 FBXO25Q8TCJ0 367 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 TMEM171Q8WVE6 324 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 FAM111AQ96PZ2 611 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 CDK15Q96Q40 435 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 PIGQQ9BRB3 760 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 FAM120CQ9NX05 1096 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 TAS2R9Q9NYW1 312 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 CPSF2Q9P2I0 782 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 HEY2Q9UBP5 337 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 UTS2RQ9UKP6 389 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 SLC12A4Q9UP95 1085 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 UTP11Q9Y3A2 253 aaKnown RBP13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 AP4B1Q9Y6B7 739 aa13.11□□□□□ -0.31
DNMT3A-207ENST00000461228 C7orf72A4D263 438 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 TRIM64A6NGJ6 449 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 TRIM64BA6NI03 449 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 RAD51CO43502 376 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 PCSK6P29122 969 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 STARP49675 285 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 RPS3AP61247 264 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 MRPS35P82673 323 aaKnown RBP13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 DUSP2Q05923 314 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 KRTAP1-1Q07627 177 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 HEPACAMQ14CZ8 416 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 LTB4RQ15722 352 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 TMEM44Q2T9K0 475 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 CYP27C1Q4G0S4 372 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 SPIN4Q56A73 249 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 MROH9Q5TGP6 573 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 DESI1Q6ICB0 168 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 ADAM5Q6NVV9 412 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 NPSR1Q6W5P4 371 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 SH2D5Q6ZV89 423 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 LARP4Q71RC2 724 aaKnown RBP eCLIP13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 RELL1Q8IUW5 271 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 SPATA4Q8NEY3 305 aa13.1□□□□□ -0.31
DNMT3A-207ENST00000461228 OR2M3Q8NG83 312 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms