RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 TMEM19Q96HH6 336 aa10.17□□□□□ -0.78
SCN9A-205ENST00000454569 LPAR4Q99677 370 aa10.17□□□□□ -0.78
SCN9A-205ENST00000454569 LMF2Q9BU23 707 aaKnown RBP10.17□□□□□ -0.78
SCN9A-205ENST00000454569 GPR87Q9BY21 358 aa10.17□□□□□ -0.78
SCN9A-205ENST00000454569 QRSL1Q9H0R6 528 aaKnown RBP10.17□□□□□ -0.78
SCN9A-205ENST00000454569 RASSF4Q9H2L5 321 aa10.17□□□□□ -0.78
SCN9A-205ENST00000454569 PIGUQ9H490 435 aa10.17□□□□□ -0.78
SCN9A-205ENST00000454569 TMEM38AQ9H6F2 299 aa10.17□□□□□ -0.78
SCN9A-205ENST00000454569 ZNF160Q9HCG1 818 aa10.17□□□□□ -0.78
SCN9A-205ENST00000454569 THSD1Q9NS62 852 aa10.17□□□□□ -0.78
SCN9A-205ENST00000454569 GPR55Q9Y2T6 319 aaPredicted RBP10.17□□□□□ -0.78
SCN9A-205ENST00000454569 PCDHGA6Q9Y5G7 932 aa10.17□□□□□ -0.78
SCN9A-205ENST00000454569 CPAMD8Q8IZJ3 1885 aa10.17□□□□□ -0.78
SCN9A-205ENST00000454569 NCOR2Q9Y618 2525 aa10.17□□□□□ -0.78
SCN9A-205ENST00000454569 MGAQ8IWI9 3026 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 URB1O60287 2271 aaKnown RBP10.16□□□□□ -0.78
SCN9A-205ENST00000454569 CACNA1AO00555 2505 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 NPIPA5A0A0B4J1W7 369 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 TCRBV5S2A0A599 114 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 NPIPA7E9PJI5 369 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 PRAMEF2O60811 474 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 OPN1SWP03999 348 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 NPIPA8P0DM63 369 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 PCGF2P35227 344 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 ID4P47928 161 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 KHKP50053 298 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 RNF144AP50876 292 aaPredicted RBP10.16□□□□□ -0.78
SCN9A-205ENST00000454569 RNF4P78317 190 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 CDK6Q00534 326 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 CHRNEQ04844 493 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 ATP1A4Q13733 1029 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 SNCBQ16143 134 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 BHLHB9Q6PI77 547 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 COMTD1Q86VU5 262 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 ZNF441Q8N8Z8 693 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 CDRT4Q8N9R6 151 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 BHLHE22Q8NFJ8 381 aaPredicted RBP10.16□□□□□ -0.78
SCN9A-205ENST00000454569 GPR151Q8TDV0 419 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 ELP5Q8TE02 316 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 ZNF578Q96N58 590 aaPredicted RBP10.16□□□□□ -0.78
SCN9A-205ENST00000454569 GAL3ST4Q96RP7 486 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 SDF2Q99470 211 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 WWTR1Q9GZV5 400 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 SLC38A1Q9H2H9 487 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 GPN2Q9H9Y4 310 aaPredicted RBP10.16□□□□□ -0.78
SCN9A-205ENST00000454569 A4GALTQ9NPC4 353 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 P4HTMQ9NXG6 502 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 FLRT3Q9NZU0 649 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 KCNE5Q9UJ90 142 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 FBXL4Q9UKA2 621 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 CORO2BQ9UQ03 480 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 PADI2Q9Y2J8 665 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 MSRB2Q9Y3D2 182 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 FREM3P0C091 2139 aa10.16□□□□□ -0.78
SCN9A-205ENST00000454569 TRBV11-1A0A0K0K1C0 115 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 A0A1W2PQ72 361 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 NKX2-8O15522 239 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 SLC28A2O43868 658 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 COQ9O75208 318 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 KCNK2O95069 426 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 PGM3O95394 542 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 H6PDO95479 791 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 CYC1P08574 325 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 ALOX5P09917 674 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 ITGAMP11215 1152 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 NR0B1P51843 470 aaKnown RBP10.15□□□□□ -0.78
SCN9A-205ENST00000454569 PCBP3P57721 371 aaKnown RBP10.15□□□□□ -0.78
SCN9A-205ENST00000454569 ACTR3P61158 418 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 BTBD16Q32M84 506 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 CYP27C1Q4G0S4 372 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 FCRLBQ6BAA4 426 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 ENPP6Q6UWR7 440 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 NDUFAF7Q7L592 441 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 MRGPREQ86SM8 312 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 C11orf65Q8NCR3 313 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 SLCO4A1Q96BD0 722 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 NXPE2Q96DL1 559 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 RMND5BQ96G75 393 aaPredicted RBP10.15□□□□□ -0.78
SCN9A-205ENST00000454569 WFDC6Q9BQY6 131 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 RAD21L1Q9H4I0 556 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 GIN1Q9NXP7 522 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 ACTR3BQ9P1U1 418 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 C19orf25Q9UFG5 118 aaPredicted RBP10.15□□□□□ -0.78
SCN9A-205ENST00000454569 MKLN1Q9UL63 735 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 SNX13Q9Y5W8 968 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 V9GYQ6 96 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 IGF2RP11717 2491 aa10.15□□□□□ -0.78
SCN9A-205ENST00000454569 TNRC6AQ8NDV7 1962 aaKnown RBP10.15□□□□□ -0.78
SCN9A-205ENST00000454569 C2orf92A0A1B0GVN3 265 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 PRAMEF25A6NGN4 478 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 M0QX08 132 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 WWP2O00308 870 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 GSTA4O15217 222 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 ASNA1O43681 348 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 TPST1O60507 370 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 IGHEP01854 428 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 CD63P08962 238 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 NR2F1P10589 423 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 KDELR2P33947 212 aa10.14□□□□□ -0.79
SCN9A-205ENST00000454569 PPICP45877 212 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms