RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 RAB2BQ8WUD1 216 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 DIO2Q92813 273 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 ZDHHC12Q96GR4 267 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 COG8Q96MW5 612 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 TGM7Q96PF1 710 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 RHNO1Q9BSD3 238 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 POLR2J3Q9H1A7 115 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 LIN28AQ9H9Z2 209 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 PDE7BQ9NP56 450 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 POLE3Q9NRF9 147 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 ENAMQ9NRM1 1142 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 MRPS33Q9Y291 106 aaKnown RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 GPR55Q9Y2T6 319 aaPredicted RBP10.99□□□□□ -0.65
SMAD3-202ENST00000439724 SIT1Q9Y3P8 196 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 RNF215Q9Y6U7 377 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 GON4LQ3T8J9 2241 aa10.99□□□□□ -0.65
SMAD3-202ENST00000439724 KNL1Q8NG31 2342 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 IGHV5-51A0A0C4DH38 117 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 HYKKA2RU49 373 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 AGAP5A6NIR3 686 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 HRO43593 1189 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 KIAA0513O60268 411 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 CTNSO60931 367 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 STX11O75558 287 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 ZBTB11O95625 1053 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-202ENST00000439724 CBX7O95931 251 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 TP53P04637 393 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-202ENST00000439724 HOXA6P31267 233 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 IFNA8P32881 189 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 CTSKP43235 329 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 FNTBP49356 437 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 RGS8P57771 180 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-202ENST00000439724 TAS2R41P59536 307 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 TARDBPQ13148 414 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMAD3-202ENST00000439724 DYNC1I2Q13409 638 aaKnown RBP10.98□□□□□ -0.65
SMAD3-202ENST00000439724 EXOSC7Q15024 291 aaKnown RBP10.98□□□□□ -0.65
SMAD3-202ENST00000439724 TRAM2Q15035 370 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 DCST2Q5T1A1 773 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 SYT6Q5T7P8 510 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-202ENST00000439724 AP1ARQ63HQ0 302 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 C12orf73Q69YU5 71 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 C1orf94Q6P1W5 598 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF836Q6ZNA1 936 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 AHSA2Q719I0 299 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 VWA5B2Q8N398 1253 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 COX18Q8N8Q8 333 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 RORBQ92753 470 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 MYDGFQ969H8 173 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 NAA50Q9GZZ1 169 aaKnown RBP10.98□□□□□ -0.65
SMAD3-202ENST00000439724 GPN2Q9H9Y4 310 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-202ENST00000439724 SOHLH2Q9NX45 425 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 HCN3Q9P1Z3 774 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 MKLN1Q9UL63 735 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 ZNF232Q9UNY5 417 aa10.98□□□□□ -0.65
SMAD3-202ENST00000439724 TNRC18O15417 2968 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-202ENST00000439724 CCDC163A0A0D9SF12 145 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 SH3D21A4FU49 640 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 CLCA1A8K7I4 914 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 H0YIG0 161 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 AP3D1O14617 1153 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 NUDT21O43809 227 aaKnown RBP10.97□□□□□ -0.65
SMAD3-202ENST00000439724 OR10H2O60403 315 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 TPST2O60704 377 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 CYP7B1O75881 506 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 INMTO95050 263 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 NKX2-2O95096 273 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 ATE1O95260 518 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 DBIP07108 87 aaKnown RBP10.97□□□□□ -0.65
SMAD3-202ENST00000439724 DCNP07585 359 aaKnown RBP10.97□□□□□ -0.65
SMAD3-202ENST00000439724 GUSBP08236 651 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 CCNYL3P0C7X3 344 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 GSTM3P21266 225 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 MMP11P24347 488 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 CNR2P34972 360 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 AVPR1BP47901 424 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 EEF1A1P68104 462 aaKnown RBP10.97□□□□□ -0.65
SMAD3-202ENST00000439724 POU6F2P78424 691 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-202ENST00000439724 DMWDQ09019 674 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 ST3GAL3Q11203 375 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 FOXD4Q12950 439 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-202ENST00000439724 COL9A2Q14055 689 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-202ENST00000439724 NR1D2Q14995 579 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 ENTPD8Q5MY95 495 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 TMEM236Q5W0B7 351 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 DGAT2L6Q6ZPD8 337 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 ZER1Q7Z7L7 766 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 GALNT12Q8IXK2 581 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 NLGN4XQ8N0W4 816 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 CLIP4Q8N3C7 705 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 TOR1AIP2Q8NFQ8 470 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 FCGR1BQ92637 280 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 SLC38A4Q969I6 547 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 PEX11GQ96HA9 241 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 BCL7BQ9BQE9 202 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 COPS4Q9BT78 406 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 LMF2Q9BU23 707 aaKnown RBP10.97□□□□□ -0.65
SMAD3-202ENST00000439724 POLR2J2Q9GZM3 115 aaKnown RBP10.97□□□□□ -0.65
SMAD3-202ENST00000439724 SLC24A3Q9HC58 644 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 ACOT13Q9NPJ3 140 aa10.97□□□□□ -0.65
SMAD3-202ENST00000439724 PRTFDC1Q9NRG1 225 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms