RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 POLR3HQ9Y535 204 aaPredicted RBP12.91□□□□□ -0.34
SMARCE1-205ENST00000431889 SH3D21A4FU49 640 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 OR6C70A6NIJ9 312 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 TO15178 435 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 SEC14L5O43304 696 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 ZIC3O60481 467 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 RCBTB2O95199 551 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 RAF1P04049 648 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 FAM153BP0C7A2 387 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 PYGBP11216 843 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 DPP4P27487 766 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 TIA1P31483 386 aaKnown RBP eCLIP12.9□□□□□ -0.341e-7■■■■□ 25.2
SMARCE1-205ENST00000431889 KRT20P35900 424 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 MC3RP41968 323 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 GAS1P54826 345 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 CLDN18P56856 261 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 ACSM2AQ08AH3 577 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 C2orf80Q0P641 193 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 SNTA1Q13424 505 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 DEFB113Q30KQ7 82 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 FAM153CQ494X1 144 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 ACSM2BQ68CK6 577 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 ANKRD26P1Q6NSI1 321 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 ENPP6Q6UWR7 440 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 P4HA3Q7Z4N8 544 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 KIF18BQ86Y91 864 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 SMPDL3BQ92485 455 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 BTBD9Q96Q07 612 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 BBS4Q96RK4 519 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 ZNF382Q96SR6 550 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 TNFRSF12AQ9NP84 129 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 NMRK1Q9NWW6 199 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 CLCF1Q9UBD9 225 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 PTGDR2Q9Y5Y4 395 aa12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 FLNAP21333 2647 aaKnown RBP12.9□□□□□ -0.34
SMARCE1-205ENST00000431889 A0A1W2PPM1 405 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 HRGP04196 525 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 ANXA4P09525 319 aaPredicted RBP12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 RHOXF2BP0C7M4 288 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 IMPDH1P20839 514 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 GCKP35557 465 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 NCBP2P52298 156 aaKnown RBP eCLIP12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 SUCLG1P53597 346 aaKnown RBP12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 DCAF7P61962 342 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 TRA2BP62995 288 aaKnown RBP12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 CSTF3Q12996 717 aaKnown RBP12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 SF3B4Q15427 424 aaKnown RBP eCLIP12.9□□□□□ -0.355e-11■■□□□ 13.3
SMARCE1-205ENST00000431889 ERCC6LQ2NKX8 1250 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 C10orf62Q5T681 223 aaPredicted RBP12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 PPP4R4Q6NUP7 873 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 OR4K17Q8NGC6 315 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 FIG4Q92562 907 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 GFM2Q969S9 779 aaKnown RBP12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 SLC35A4Q96G79 324 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 ZC3HAV1LQ96H79 300 aaKnown RBP12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 PIGQQ9BRB3 760 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 OPN3Q9H1Y3 402 aaPredicted RBP12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 GSTO2Q9H4Y5 243 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 MID1IP1Q9NPA3 183 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 KLHL28Q9NXS3 571 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 FETUBQ9UGM5 382 aa12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 FOXD3Q9UJU5 478 aaPredicted RBP12.9□□□□□ -0.35
SMARCE1-205ENST00000431889 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 A0A1W2PNV4 684 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 H3BML4 177 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 TNFSF13O75888 250 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 OPN1LWP04000 364 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 ATP5F1P24539 256 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 SRD5A2P31213 254 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 CLDN15P56746 228 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 B3GALT5-AS1P59052 145 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 RAET1LQ5VY80 246 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 TMEM81Q6P7N7 255 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 ZNF550Q7Z398 422 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 MARCH3Q86UD3 253 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 FAM9CQ8IZT9 166 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 ZNF675Q8TD23 568 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 WNT2BQ93097 391 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 ZNF845Q96IR2 970 aaPredicted RBP12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 FAM111AQ96PZ2 611 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 ALPK1Q96QP1 1244 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 TM9SF2Q99805 663 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 SFXN3Q9BWM7 321 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 EQTNQ9NQ60 294 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 PPP4R1LQ9P1A2 415 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 EMCNQ9ULC0 261 aa12.89□□□□□ -0.35
SMARCE1-205ENST00000431889 SIAH2O43255 324 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 RIPK2O43353 540 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 CDH16O75309 829 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 IL18BPO95998 194 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 DRD2P14416 443 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 ZNF708P17019 499 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 HK1P19367 917 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 EVI2BP34910 448 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 PRKAA2P54646 552 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 PSG6Q00889 435 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 GAB1Q13480 694 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 HEPACAMQ14CZ8 416 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 ANKRD34AQ69YU3 496 aa12.88□□□□□ -0.35
SMARCE1-205ENST00000431889 AAGABQ6PD74 315 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms