RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 FRG2CA6NGY1 282 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 C5orf58C9J3I9 102 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 HRKO00198 91 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 TAF4O00268 1085 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 ACOX3O15254 700 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 MFN2O95140 757 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 SERPINA1P01009 418 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 NR2F1P10589 423 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 PTGER1P34995 402 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 PIGAP37287 484 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 CLDN6P56747 220 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 MRPS22P82650 360 aaKnown RBP13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 SSPNQ14714 243 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 EXOSC7Q15024 291 aaKnown RBP13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 SYPL1Q16563 259 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 SFT2D3Q587I9 215 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 RNF111Q6ZNA4 994 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 PIWIL3Q7Z3Z3 882 aaKnown RBP13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 SZRD1Q7Z422 152 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 ARMC8Q8IUR7 673 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 ZNF441Q8N8Z8 693 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 APCDD1LQ8NCL9 501 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 SDF2Q99470 211 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 LPAR4Q99677 370 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 DOHHQ9BU89 302 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 CNPPD1Q9BV87 410 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 SLC38A1Q9H2H9 487 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 IL1RAPQ9NPH3 570 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 ASCL3Q9NQ33 180 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 PNO1Q9NRX1 252 aaKnown RBP13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 COPS7AQ9UBW8 275 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 TCFL5Q9UL49 500 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 FARSAQ9Y285 508 aaKnown RBP13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 PKD1L2Q7Z442 2459 aa13.23□□□□□ -0.29
SHMT1P1-201ENST00000419974 PMS2P1A4D2B8 440 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 TRABD2BA6NFA1 517 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 M0QX08 132 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 SUV39H1O43463 412 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 SLC28A2O43868 658 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 STX11O75558 287 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 KRT36O76013 467 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 BCHEP06276 602 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 THBS1P07996 1170 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 CHRM4P08173 479 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 RPS4Y1P22090 263 aaKnown RBP13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 PGDP52209 483 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 CASP9P55211 416 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 RPS15P62841 145 aaKnown RBP13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 EBPQ15125 230 aaKnown RBP13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 ZSWIM7Q19AV6 140 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 FAM199XQ6PEV8 388 aaPredicted RBP13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 LANCL3Q6ZV70 420 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 ARMC10Q8N2F6 343 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 ANKFN1Q8N957 763 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 APOBEC4Q8WW27 367 aaKnown RBP13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 LZICQ8WZA0 190 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 SLC9A6Q92581 669 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 TAMM41Q96BW9 452 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 VMP1Q96GC9 406 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 VPS50Q96JG6 964 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 G6PC3Q9BUM1 346 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 RUBCNLQ9H714 662 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 Q9N2J8 555 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 EQTNQ9NQ60 294 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 KCND3Q9UK17 655 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 PRDM4Q9UKN5 801 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 BAG5Q9UL15 447 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 IFT52Q9Y366 437 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 HS3ST3B1Q9Y662 390 aa13.22□□□□□ -0.29
SHMT1P1-201ENST00000419974 ACACAQ13085 2346 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 IGHV1-45A0A0A0MS14 117 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 MYOCOSA0A1B0GUC4 107 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 SYT5O00445 386 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 CASQ2O14958 399 aaPredicted RBP13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 KIAA0513O60268 411 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 RAD1O60671 282 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 PRKD3O94806 890 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 KCNK2O95069 426 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 PRSS23O95084 383 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 H6PDO95479 791 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 ANPEPP15144 967 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 TCN2P20062 427 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 RBMS1P29558 406 aaKnown RBP13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 PRKAR1BP31321 381 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 FOLR3P41439 243 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 KCNJ5P48544 419 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 GABREP78334 506 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 POU6F2P78424 691 aaPredicted RBP13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 CHRNB3Q05901 458 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 SLC34A1Q06495 639 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 COL9A2Q14055 689 aaPredicted RBP13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 PCOLCEQ15113 449 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 RCN1Q15293 331 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 EXT1Q16394 746 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 CYBRD1Q53TN4 286 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 DCST2Q5T1A1 773 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 PLAG1Q6DJT9 500 aa13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 PAPD4Q6PIY7 484 aaKnown RBP13.21□□□□□ -0.29
SHMT1P1-201ENST00000419974 FRRS1Q6ZNA5 592 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms